Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MBD3L1Q8WWY6 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
MBD3L1Q8WWY6 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
MBD3L1Q8WWY6 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MBD3L1Q8WWY6 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MBD3L1Q8WWY6 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC18.98■□□□□ 0.63
MBD3L1Q8WWY6 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MBD3L1Q8WWY6 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
MBD3L1Q8WWY6 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MBD3L1Q8WWY6 AC096887.2-201ENST00000623443 1957 ntBASIC18.97■□□□□ 0.63
MBD3L1Q8WWY6 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MBD3L1Q8WWY6 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
MBD3L1Q8WWY6 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MBD3L1Q8WWY6 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
MBD3L1Q8WWY6 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MBD3L1Q8WWY6 AP003733.4-201ENST00000623785 1697 ntBASIC18.97■□□□□ 0.63
MBD3L1Q8WWY6 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MBD3L1Q8WWY6 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC18.97■□□□□ 0.63
MBD3L1Q8WWY6 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.96■□□□□ 0.63
MBD3L1Q8WWY6 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MBD3L1Q8WWY6 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MBD3L1Q8WWY6 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
MBD3L1Q8WWY6 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
MBD3L1Q8WWY6 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
MBD3L1Q8WWY6 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
MBD3L1Q8WWY6 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MBD3L1Q8WWY6 LINC00273-201ENST00000539813 1452 ntBASIC18.96■□□□□ 0.63
MBD3L1Q8WWY6 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.96■□□□□ 0.63
MBD3L1Q8WWY6 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MBD3L1Q8WWY6 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MBD3L1Q8WWY6 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MBD3L1Q8WWY6 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
MBD3L1Q8WWY6 EBPL-202ENST00000378268 680 ntTSL 3 BASIC18.95■□□□□ 0.62
MBD3L1Q8WWY6 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
MBD3L1Q8WWY6 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC18.95■□□□□ 0.62
MBD3L1Q8WWY6 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
MBD3L1Q8WWY6 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MBD3L1Q8WWY6 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MBD3L1Q8WWY6 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MBD3L1Q8WWY6 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MBD3L1Q8WWY6 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC18.94■□□□□ 0.62
MBD3L1Q8WWY6 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
MBD3L1Q8WWY6 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MBD3L1Q8WWY6 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MBD3L1Q8WWY6 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
MBD3L1Q8WWY6 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MBD3L1Q8WWY6 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC18.93■□□□□ 0.62
MBD3L1Q8WWY6 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
MBD3L1Q8WWY6 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MBD3L1Q8WWY6 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MBD3L1Q8WWY6 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC18.92■□□□□ 0.62
MBD3L1Q8WWY6 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MBD3L1Q8WWY6 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MBD3L1Q8WWY6 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
MBD3L1Q8WWY6 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
MBD3L1Q8WWY6 CLDN5-201ENST00000403084 2357 ntBASIC18.91■□□□□ 0.62
MBD3L1Q8WWY6 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MBD3L1Q8WWY6 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MBD3L1Q8WWY6 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MBD3L1Q8WWY6 DUSP8P5-201ENST00000422884 1815 ntBASIC18.91■□□□□ 0.62
MBD3L1Q8WWY6 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MBD3L1Q8WWY6 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
MBD3L1Q8WWY6 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
MBD3L1Q8WWY6 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC18.91■□□□□ 0.62
MBD3L1Q8WWY6 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC18.91■□□□□ 0.62
MBD3L1Q8WWY6 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
MBD3L1Q8WWY6 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
MBD3L1Q8WWY6 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC18.9■□□□□ 0.62
MBD3L1Q8WWY6 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MBD3L1Q8WWY6 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC18.9■□□□□ 0.62
MBD3L1Q8WWY6 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC18.9■□□□□ 0.62
MBD3L1Q8WWY6 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MBD3L1Q8WWY6 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
MBD3L1Q8WWY6 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
MBD3L1Q8WWY6 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MBD3L1Q8WWY6 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.9■□□□□ 0.62
MBD3L1Q8WWY6 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MBD3L1Q8WWY6 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
MBD3L1Q8WWY6 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MBD3L1Q8WWY6 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
MBD3L1Q8WWY6 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MBD3L1Q8WWY6 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MBD3L1Q8WWY6 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
MBD3L1Q8WWY6 EI24-212ENST00000615917 1407 ntTSL 2 BASIC18.88■□□□□ 0.61
MBD3L1Q8WWY6 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
MBD3L1Q8WWY6 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MBD3L1Q8WWY6 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MBD3L1Q8WWY6 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MBD3L1Q8WWY6 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
MBD3L1Q8WWY6 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
MBD3L1Q8WWY6 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC18.87■□□□□ 0.61
MBD3L1Q8WWY6 AL391121.1-201ENST00000607967 1349 ntBASIC18.87■□□□□ 0.61
MBD3L1Q8WWY6 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MBD3L1Q8WWY6 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.86■□□□□ 0.61
MBD3L1Q8WWY6 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MBD3L1Q8WWY6 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MBD3L1Q8WWY6 AC141586.4-201ENST00000624558 1573 ntBASIC18.86■□□□□ 0.61
MBD3L1Q8WWY6 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MBD3L1Q8WWY6 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC18.86■□□□□ 0.61
MBD3L1Q8WWY6 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms