Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC22.14■■□□□ 1.13
RNF138Q8WVD3 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
RNF138Q8WVD3 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RNF138Q8WVD3 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RNF138Q8WVD3 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
RNF138Q8WVD3 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
RNF138Q8WVD3 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
RNF138Q8WVD3 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
RNF138Q8WVD3 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
RNF138Q8WVD3 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
RNF138Q8WVD3 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC22.12■■□□□ 1.13
RNF138Q8WVD3 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
RNF138Q8WVD3 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RNF138Q8WVD3 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RNF138Q8WVD3 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RNF138Q8WVD3 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RNF138Q8WVD3 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC22.11■■□□□ 1.13
RNF138Q8WVD3 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RNF138Q8WVD3 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RNF138Q8WVD3 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC22.11■■□□□ 1.13
RNF138Q8WVD3 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RNF138Q8WVD3 SPCS2P3-201ENST00000500401 656 ntBASIC22.1■■□□□ 1.13
RNF138Q8WVD3 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC22.1■■□□□ 1.13
RNF138Q8WVD3 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC22.1■■□□□ 1.13
RNF138Q8WVD3 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RNF138Q8WVD3 AC129492.7-201ENST00000622992 756 ntBASIC22.1■■□□□ 1.13
RNF138Q8WVD3 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC22.1■■□□□ 1.13
RNF138Q8WVD3 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC22.09■■□□□ 1.13
RNF138Q8WVD3 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RNF138Q8WVD3 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RNF138Q8WVD3 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RNF138Q8WVD3 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RNF138Q8WVD3 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC22.09■■□□□ 1.13
RNF138Q8WVD3 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RNF138Q8WVD3 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC22.08■■□□□ 1.13
RNF138Q8WVD3 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC22.08■■□□□ 1.13
RNF138Q8WVD3 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
RNF138Q8WVD3 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
RNF138Q8WVD3 AC092803.2-201ENST00000564287 1899 ntBASIC22.07■■□□□ 1.12
RNF138Q8WVD3 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RNF138Q8WVD3 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
RNF138Q8WVD3 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC22.07■■□□□ 1.12
RNF138Q8WVD3 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC22.07■■□□□ 1.12
RNF138Q8WVD3 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RNF138Q8WVD3 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RNF138Q8WVD3 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RNF138Q8WVD3 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC22.06■■□□□ 1.12
RNF138Q8WVD3 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC22.06■■□□□ 1.12
RNF138Q8WVD3 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RNF138Q8WVD3 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RNF138Q8WVD3 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
RNF138Q8WVD3 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RNF138Q8WVD3 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC22.06■■□□□ 1.12
RNF138Q8WVD3 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RNF138Q8WVD3 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RNF138Q8WVD3 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC22.05■■□□□ 1.12
RNF138Q8WVD3 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
RNF138Q8WVD3 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC22.05■■□□□ 1.12
RNF138Q8WVD3 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC22.05■■□□□ 1.12
RNF138Q8WVD3 DUX4L9-201ENST00000449051 1259 ntBASIC22.04■■□□□ 1.12
RNF138Q8WVD3 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC22.04■■□□□ 1.12
RNF138Q8WVD3 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
RNF138Q8WVD3 AC091060.1-201ENST00000623524 1766 ntBASIC22.04■■□□□ 1.12
RNF138Q8WVD3 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC22.03■■□□□ 1.12
RNF138Q8WVD3 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RNF138Q8WVD3 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
RNF138Q8WVD3 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RNF138Q8WVD3 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
RNF138Q8WVD3 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC22.03■■□□□ 1.12
RNF138Q8WVD3 AC010501.1-201ENST00000606270 1962 ntBASIC22.03■■□□□ 1.12
RNF138Q8WVD3 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RNF138Q8WVD3 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RNF138Q8WVD3 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
RNF138Q8WVD3 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC22.02■■□□□ 1.12
RNF138Q8WVD3 DUSP8P4-201ENST00000399538 1761 ntBASIC22.02■■□□□ 1.12
RNF138Q8WVD3 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC22.02■■□□□ 1.12
RNF138Q8WVD3 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RNF138Q8WVD3 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RNF138Q8WVD3 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RNF138Q8WVD3 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.11
RNF138Q8WVD3 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
RNF138Q8WVD3 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
RNF138Q8WVD3 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RNF138Q8WVD3 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
RNF138Q8WVD3 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC22.01■■□□□ 1.11
RNF138Q8WVD3 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC22.01■■□□□ 1.11
RNF138Q8WVD3 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RNF138Q8WVD3 ERN1-208ENST00000606895 2068 ntBASIC22■■□□□ 1.11
RNF138Q8WVD3 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RNF138Q8WVD3 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22■■□□□ 1.11
RNF138Q8WVD3 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC22■■□□□ 1.11
RNF138Q8WVD3 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RNF138Q8WVD3 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC22■■□□□ 1.11
RNF138Q8WVD3 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RNF138Q8WVD3 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
RNF138Q8WVD3 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF138Q8WVD3 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF138Q8WVD3 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.99■■□□□ 1.11
RNF138Q8WVD3 AC004987.1-201ENST00000428627 508 ntBASIC21.99■■□□□ 1.11
RNF138Q8WVD3 AC012354.3-201ENST00000623734 483 ntBASIC21.99■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms