Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC28.87■■■□□ 2.21
NKX2-3Q8TAU0 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
NKX2-3Q8TAU0 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
NKX2-3Q8TAU0 PFN2-211ENST00000489155 636 ntTSL 4 BASIC28.87■■■□□ 2.21
NKX2-3Q8TAU0 AC026202.3-201ENST00000600805 1127 ntBASIC28.87■■■□□ 2.21
NKX2-3Q8TAU0 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
NKX2-3Q8TAU0 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC28.86■■■□□ 2.21
NKX2-3Q8TAU0 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC28.86■■■□□ 2.21
NKX2-3Q8TAU0 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
NKX2-3Q8TAU0 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC28.86■■■□□ 2.21
NKX2-3Q8TAU0 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC28.86■■■□□ 2.21
NKX2-3Q8TAU0 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
NKX2-3Q8TAU0 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
NKX2-3Q8TAU0 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
NKX2-3Q8TAU0 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC28.84■■■□□ 2.21
NKX2-3Q8TAU0 AC093536.1-201ENST00000569153 554 ntBASIC28.84■■■□□ 2.21
NKX2-3Q8TAU0 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC28.84■■■□□ 2.21
NKX2-3Q8TAU0 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
NKX2-3Q8TAU0 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
NKX2-3Q8TAU0 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC28.83■■■□□ 2.21
NKX2-3Q8TAU0 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC28.83■■■□□ 2.21
NKX2-3Q8TAU0 RAP2CP1-202ENST00000605179 643 ntBASIC28.83■■■□□ 2.21
NKX2-3Q8TAU0 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
NKX2-3Q8TAU0 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC28.83■■■□□ 2.21
NKX2-3Q8TAU0 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC28.82■■■□□ 2.2
NKX2-3Q8TAU0 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC28.82■■■□□ 2.2
NKX2-3Q8TAU0 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC28.82■■■□□ 2.2
NKX2-3Q8TAU0 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC28.82■■■□□ 2.2
NKX2-3Q8TAU0 RP9P-202ENST00000450133 1212 ntBASIC28.82■■■□□ 2.2
NKX2-3Q8TAU0 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC28.82■■■□□ 2.2
NKX2-3Q8TAU0 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC28.82■■■□□ 2.2
NKX2-3Q8TAU0 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC28.81■■■□□ 2.2
NKX2-3Q8TAU0 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
NKX2-3Q8TAU0 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
NKX2-3Q8TAU0 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC28.81■■■□□ 2.2
NKX2-3Q8TAU0 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
NKX2-3Q8TAU0 REST-210ENST00000638187 1334 ntTSL 5 BASIC28.81■■■□□ 2.2
NKX2-3Q8TAU0 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC28.81■■■□□ 2.2
NKX2-3Q8TAU0 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC28.8■■■□□ 2.2
NKX2-3Q8TAU0 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
NKX2-3Q8TAU0 AC131212.1-201ENST00000613771 668 ntBASIC28.8■■■□□ 2.2
NKX2-3Q8TAU0 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC28.8■■■□□ 2.2
NKX2-3Q8TAU0 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
NKX2-3Q8TAU0 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC28.79■■■□□ 2.2
NKX2-3Q8TAU0 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
NKX2-3Q8TAU0 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
NKX2-3Q8TAU0 AL592293.1-201ENST00000502889 1188 ntBASIC28.79■■■□□ 2.2
NKX2-3Q8TAU0 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC28.79■■■□□ 2.2
NKX2-3Q8TAU0 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
NKX2-3Q8TAU0 AC133552.2-201ENST00000619106 1032 ntBASIC28.78■■■□□ 2.2
NKX2-3Q8TAU0 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
NKX2-3Q8TAU0 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC28.78■■■□□ 2.2
NKX2-3Q8TAU0 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
NKX2-3Q8TAU0 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
NKX2-3Q8TAU0 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC28.77■■■□□ 2.2
NKX2-3Q8TAU0 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC28.76■■■□□ 2.19
NKX2-3Q8TAU0 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
NKX2-3Q8TAU0 MIR3960-201ENST00000583311 91 ntBASIC28.76■■■□□ 2.19
NKX2-3Q8TAU0 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC28.76■■■□□ 2.19
NKX2-3Q8TAU0 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC28.76■■■□□ 2.19
NKX2-3Q8TAU0 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
NKX2-3Q8TAU0 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC28.75■■■□□ 2.19
NKX2-3Q8TAU0 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC28.75■■■□□ 2.19
NKX2-3Q8TAU0 SPCS2P3-201ENST00000500401 656 ntBASIC28.75■■■□□ 2.19
NKX2-3Q8TAU0 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
NKX2-3Q8TAU0 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC28.75■■■□□ 2.19
NKX2-3Q8TAU0 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC28.75■■■□□ 2.19
NKX2-3Q8TAU0 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
NKX2-3Q8TAU0 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
NKX2-3Q8TAU0 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC28.74■■■□□ 2.19
NKX2-3Q8TAU0 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
NKX2-3Q8TAU0 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC28.73■■■□□ 2.19
NKX2-3Q8TAU0 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
NKX2-3Q8TAU0 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
NKX2-3Q8TAU0 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC28.73■■■□□ 2.19
NKX2-3Q8TAU0 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
NKX2-3Q8TAU0 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
NKX2-3Q8TAU0 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC28.72■■■□□ 2.19
NKX2-3Q8TAU0 AC074183.2-201ENST00000623112 922 ntBASIC28.71■■■□□ 2.19
NKX2-3Q8TAU0 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
NKX2-3Q8TAU0 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
NKX2-3Q8TAU0 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
NKX2-3Q8TAU0 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
NKX2-3Q8TAU0 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
NKX2-3Q8TAU0 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC28.7■■■□□ 2.18
NKX2-3Q8TAU0 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC28.7■■■□□ 2.18
NKX2-3Q8TAU0 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC28.7■■■□□ 2.18
NKX2-3Q8TAU0 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC28.7■■■□□ 2.18
NKX2-3Q8TAU0 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC28.7■■■□□ 2.18
NKX2-3Q8TAU0 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC28.7■■■□□ 2.18
NKX2-3Q8TAU0 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC28.69■■■□□ 2.18
NKX2-3Q8TAU0 HES6-204ENST00000409182 863 ntTSL 2 BASIC28.69■■■□□ 2.18
NKX2-3Q8TAU0 AC009299.2-201ENST00000482477 511 ntBASIC28.69■■■□□ 2.18
NKX2-3Q8TAU0 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC28.69■■■□□ 2.18
NKX2-3Q8TAU0 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
NKX2-3Q8TAU0 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
NKX2-3Q8TAU0 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC28.68■■■□□ 2.18
NKX2-3Q8TAU0 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
NKX2-3Q8TAU0 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC28.68■■■□□ 2.18
NKX2-3Q8TAU0 BHLHE23-202ENST00000612929 1109 ntBASIC28.68■■■□□ 2.18
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms