Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CPEB3Q8NE35 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
CPEB3Q8NE35 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CPEB3Q8NE35 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
CPEB3Q8NE35 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CPEB3Q8NE35 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.14■□□□□ 0.97
CPEB3Q8NE35 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CPEB3Q8NE35 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CPEB3Q8NE35 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.13■□□□□ 0.97
CPEB3Q8NE35 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPEB3Q8NE35 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.12■□□□□ 0.97
CPEB3Q8NE35 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPEB3Q8NE35 AC093536.1-201ENST00000569153 554 ntBASIC21.12■□□□□ 0.97
CPEB3Q8NE35 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.12■□□□□ 0.97
CPEB3Q8NE35 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CPEB3Q8NE35 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.12■□□□□ 0.97
CPEB3Q8NE35 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.12■□□□□ 0.97
CPEB3Q8NE35 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
CPEB3Q8NE35 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CPEB3Q8NE35 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.11■□□□□ 0.97
CPEB3Q8NE35 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPEB3Q8NE35 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.11■□□□□ 0.97
CPEB3Q8NE35 ERN1-208ENST00000606895 2068 ntBASIC21.11■□□□□ 0.97
CPEB3Q8NE35 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.1■□□□□ 0.97
CPEB3Q8NE35 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CPEB3Q8NE35 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CPEB3Q8NE35 AC145676.1-201ENST00000514988 2004 ntBASIC21.1■□□□□ 0.97
CPEB3Q8NE35 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CPEB3Q8NE35 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CPEB3Q8NE35 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPEB3Q8NE35 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPEB3Q8NE35 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPEB3Q8NE35 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.09■□□□□ 0.97
CPEB3Q8NE35 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CPEB3Q8NE35 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPEB3Q8NE35 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.09■□□□□ 0.97
CPEB3Q8NE35 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CPEB3Q8NE35 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.08■□□□□ 0.97
CPEB3Q8NE35 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.08■□□□□ 0.97
CPEB3Q8NE35 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CPEB3Q8NE35 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.08■□□□□ 0.97
CPEB3Q8NE35 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CPEB3Q8NE35 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.96
CPEB3Q8NE35 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CPEB3Q8NE35 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CPEB3Q8NE35 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPEB3Q8NE35 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.07■□□□□ 0.96
CPEB3Q8NE35 AC026202.3-201ENST00000600805 1127 ntBASIC21.07■□□□□ 0.96
CPEB3Q8NE35 DUSP8P4-201ENST00000399538 1761 ntBASIC21.07■□□□□ 0.96
CPEB3Q8NE35 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPEB3Q8NE35 RAP2CP1-202ENST00000605179 643 ntBASIC21.06■□□□□ 0.96
CPEB3Q8NE35 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPEB3Q8NE35 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
CPEB3Q8NE35 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPEB3Q8NE35 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CPEB3Q8NE35 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CPEB3Q8NE35 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.05■□□□□ 0.96
CPEB3Q8NE35 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CPEB3Q8NE35 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CPEB3Q8NE35 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CPEB3Q8NE35 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.04■□□□□ 0.96
CPEB3Q8NE35 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPEB3Q8NE35 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPEB3Q8NE35 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC21.04■□□□□ 0.96
CPEB3Q8NE35 AC009831.1-201ENST00000580420 1582 ntBASIC21.04■□□□□ 0.96
CPEB3Q8NE35 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPEB3Q8NE35 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPEB3Q8NE35 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPEB3Q8NE35 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CPEB3Q8NE35 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CPEB3Q8NE35 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CPEB3Q8NE35 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CPEB3Q8NE35 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CPEB3Q8NE35 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.03■□□□□ 0.96
CPEB3Q8NE35 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.03■□□□□ 0.96
CPEB3Q8NE35 AC010501.1-201ENST00000606270 1962 ntBASIC21.03■□□□□ 0.96
CPEB3Q8NE35 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CPEB3Q8NE35 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CPEB3Q8NE35 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CPEB3Q8NE35 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.02■□□□□ 0.96
CPEB3Q8NE35 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CPEB3Q8NE35 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CPEB3Q8NE35 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.02■□□□□ 0.96
CPEB3Q8NE35 AC133552.2-201ENST00000619106 1032 ntBASIC21.02■□□□□ 0.96
CPEB3Q8NE35 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CPEB3Q8NE35 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CPEB3Q8NE35 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPEB3Q8NE35 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CPEB3Q8NE35 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CPEB3Q8NE35 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPEB3Q8NE35 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CPEB3Q8NE35 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.01■□□□□ 0.95
CPEB3Q8NE35 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPEB3Q8NE35 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPEB3Q8NE35 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CPEB3Q8NE35 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
CPEB3Q8NE35 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CPEB3Q8NE35 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CPEB3Q8NE35 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.99■□□□□ 0.95
CPEB3Q8NE35 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms