Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC38.55■■■■□ 3.76
CFAP43Q8NDM7 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC38.55■■■■□ 3.76
CFAP43Q8NDM7 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC38.55■■■■□ 3.76
CFAP43Q8NDM7 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC38.55■■■■□ 3.76
CFAP43Q8NDM7 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC38.55■■■■□ 3.76
CFAP43Q8NDM7 AC018755.3-202ENST00000596210 929 ntBASIC38.55■■■■□ 3.76
CFAP43Q8NDM7 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC38.54■■■■□ 3.76
CFAP43Q8NDM7 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC38.53■■■■□ 3.76
CFAP43Q8NDM7 AC239859.2-201ENST00000444165 318 ntBASIC38.53■■■■□ 3.76
CFAP43Q8NDM7 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC38.53■■■■□ 3.76
CFAP43Q8NDM7 AC019171.1-201ENST00000601251 1056 ntBASIC38.53■■■■□ 3.76
CFAP43Q8NDM7 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC38.53■■■■□ 3.76
CFAP43Q8NDM7 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC38.53■■■■□ 3.76
CFAP43Q8NDM7 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC38.53■■■■□ 3.76
CFAP43Q8NDM7 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC38.53■■■■□ 3.76
CFAP43Q8NDM7 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC38.52■■■■□ 3.76
CFAP43Q8NDM7 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC38.52■■■■□ 3.76
CFAP43Q8NDM7 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC38.52■■■■□ 3.76
CFAP43Q8NDM7 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC38.52■■■■□ 3.76
CFAP43Q8NDM7 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC38.52■■■■□ 3.76
CFAP43Q8NDM7 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC38.52■■■■□ 3.76
CFAP43Q8NDM7 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC38.51■■■■□ 3.76
CFAP43Q8NDM7 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC38.51■■■■□ 3.76
CFAP43Q8NDM7 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC38.51■■■■□ 3.75
CFAP43Q8NDM7 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC38.5■■■■□ 3.75
CFAP43Q8NDM7 AL449106.1-201ENST00000608517 1980 ntBASIC38.5■■■■□ 3.75
CFAP43Q8NDM7 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC38.49■■■■□ 3.75
CFAP43Q8NDM7 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC38.49■■■■□ 3.75
CFAP43Q8NDM7 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC38.48■■■■□ 3.75
CFAP43Q8NDM7 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC38.47■■■■□ 3.75
CFAP43Q8NDM7 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC38.47■■■■□ 3.75
CFAP43Q8NDM7 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC38.46■■■■□ 3.75
CFAP43Q8NDM7 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC38.46■■■■□ 3.75
CFAP43Q8NDM7 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC38.46■■■■□ 3.75
CFAP43Q8NDM7 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC38.46■■■■□ 3.75
CFAP43Q8NDM7 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC38.46■■■■□ 3.75
CFAP43Q8NDM7 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC38.45■■■■□ 3.75
CFAP43Q8NDM7 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC38.45■■■■□ 3.75
CFAP43Q8NDM7 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC38.45■■■■□ 3.75
CFAP43Q8NDM7 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC38.44■■■■□ 3.74
CFAP43Q8NDM7 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC38.43■■■■□ 3.74
CFAP43Q8NDM7 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC38.43■■■■□ 3.74
CFAP43Q8NDM7 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC38.43■■■■□ 3.74
CFAP43Q8NDM7 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC38.43■■■■□ 3.74
CFAP43Q8NDM7 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC38.42■■■■□ 3.74
CFAP43Q8NDM7 PEMT-206ENST00000435340 960 ntTSL 5 BASIC38.42■■■■□ 3.74
CFAP43Q8NDM7 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC38.42■■■■□ 3.74
CFAP43Q8NDM7 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC38.42■■■■□ 3.74
CFAP43Q8NDM7 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC38.41■■■■□ 3.74
CFAP43Q8NDM7 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC38.41■■■■□ 3.74
CFAP43Q8NDM7 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC38.4■■■■□ 3.74
CFAP43Q8NDM7 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC38.39■■■■□ 3.74
CFAP43Q8NDM7 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC38.39■■■■□ 3.74
CFAP43Q8NDM7 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC38.39■■■■□ 3.74
CFAP43Q8NDM7 BX255925.1-201ENST00000566954 1854 ntBASIC38.38■■■■□ 3.73
CFAP43Q8NDM7 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC38.38■■■■□ 3.73
CFAP43Q8NDM7 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC38.38■■■■□ 3.73
CFAP43Q8NDM7 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC38.37■■■■□ 3.73
CFAP43Q8NDM7 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC38.37■■■■□ 3.73
CFAP43Q8NDM7 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC38.36■■■■□ 3.73
CFAP43Q8NDM7 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC38.36■■■■□ 3.73
CFAP43Q8NDM7 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC38.36■■■■□ 3.73
CFAP43Q8NDM7 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC38.36■■■■□ 3.73
CFAP43Q8NDM7 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC38.35■■■■□ 3.73
CFAP43Q8NDM7 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC38.35■■■■□ 3.73
CFAP43Q8NDM7 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC38.35■■■■□ 3.73
CFAP43Q8NDM7 UNC93B8-201ENST00000511903 705 ntBASIC38.35■■■■□ 3.73
CFAP43Q8NDM7 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC38.35■■■■□ 3.73
CFAP43Q8NDM7 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC38.35■■■■□ 3.73
CFAP43Q8NDM7 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC38.35■■■■□ 3.73
CFAP43Q8NDM7 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC38.34■■■■□ 3.73
CFAP43Q8NDM7 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC38.34■■■■□ 3.73
CFAP43Q8NDM7 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC38.34■■■■□ 3.73
CFAP43Q8NDM7 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC38.34■■■■□ 3.73
CFAP43Q8NDM7 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC38.33■■■■□ 3.73
CFAP43Q8NDM7 KRT16P3-201ENST00000439127 1283 ntBASIC38.33■■■■□ 3.73
CFAP43Q8NDM7 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC38.33■■■■□ 3.73
CFAP43Q8NDM7 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC38.33■■■■□ 3.73
CFAP43Q8NDM7 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC38.32■■■■□ 3.73
CFAP43Q8NDM7 AC087393.1-201ENST00000582896 145 ntBASIC38.32■■■■□ 3.72
CFAP43Q8NDM7 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC38.32■■■■□ 3.72
CFAP43Q8NDM7 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC38.32■■■■□ 3.72
CFAP43Q8NDM7 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC38.31■■■■□ 3.72
CFAP43Q8NDM7 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC38.31■■■■□ 3.72
CFAP43Q8NDM7 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC38.31■■■■□ 3.72
CFAP43Q8NDM7 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC38.31■■■■□ 3.72
CFAP43Q8NDM7 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC38.31■■■■□ 3.72
CFAP43Q8NDM7 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC38.31■■■■□ 3.72
CFAP43Q8NDM7 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC38.3■■■■□ 3.72
CFAP43Q8NDM7 LONRF2P2-201ENST00000439212 571 ntBASIC38.3■■■■□ 3.72
CFAP43Q8NDM7 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC38.29■■■■□ 3.72
CFAP43Q8NDM7 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC38.29■■■■□ 3.72
CFAP43Q8NDM7 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC38.29■■■■□ 3.72
CFAP43Q8NDM7 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC38.29■■■■□ 3.72
CFAP43Q8NDM7 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC38.28■■■■□ 3.72
CFAP43Q8NDM7 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC38.28■■■■□ 3.72
CFAP43Q8NDM7 AC142086.6-201ENST00000621154 1765 ntBASIC38.28■■■■□ 3.72
CFAP43Q8NDM7 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC38.27■■■■□ 3.72
CFAP43Q8NDM7 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC38.27■■■■□ 3.72
CFAP43Q8NDM7 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC38.27■■■■□ 3.72
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms