Protein–RNA interactions for Protein: Q8N1G2

CMTR1, Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1, humanhuman

Known RBP Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTR1Q8N1G2 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
CMTR1Q8N1G2 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC28.2■■■□□ 2.1
CMTR1Q8N1G2 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC28.2■■■□□ 2.1
CMTR1Q8N1G2 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC28.2■■■□□ 2.1
CMTR1Q8N1G2 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC28.19■■■□□ 2.1
CMTR1Q8N1G2 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
CMTR1Q8N1G2 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC28.19■■■□□ 2.1
CMTR1Q8N1G2 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
CMTR1Q8N1G2 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
CMTR1Q8N1G2 AL592293.1-201ENST00000502889 1188 ntBASIC28.19■■■□□ 2.1
CMTR1Q8N1G2 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC28.19■■■□□ 2.1
CMTR1Q8N1G2 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC28.19■■■□□ 2.1
CMTR1Q8N1G2 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
CMTR1Q8N1G2 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC28.18■■■□□ 2.1
CMTR1Q8N1G2 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CMTR1Q8N1G2 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
CMTR1Q8N1G2 AC091060.1-201ENST00000623524 1766 ntBASIC28.18■■■□□ 2.1
CMTR1Q8N1G2 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
CMTR1Q8N1G2 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CMTR1Q8N1G2 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CMTR1Q8N1G2 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
CMTR1Q8N1G2 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC28.17■■■□□ 2.1
CMTR1Q8N1G2 KRT18P60-201ENST00000312876 1297 ntBASIC28.17■■■□□ 2.1
CMTR1Q8N1G2 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC28.17■■■□□ 2.1
CMTR1Q8N1G2 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CMTR1Q8N1G2 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC28.17■■■□□ 2.1
CMTR1Q8N1G2 NTF6A-201ENST00000591175 560 ntBASIC28.17■■■□□ 2.1
CMTR1Q8N1G2 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC28.17■■■□□ 2.1
CMTR1Q8N1G2 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CMTR1Q8N1G2 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC28.16■■■□□ 2.1
CMTR1Q8N1G2 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
CMTR1Q8N1G2 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
CMTR1Q8N1G2 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC28.16■■■□□ 2.1
CMTR1Q8N1G2 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
CMTR1Q8N1G2 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC28.16■■■□□ 2.1
CMTR1Q8N1G2 AC092803.2-201ENST00000564287 1899 ntBASIC28.16■■■□□ 2.1
CMTR1Q8N1G2 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
CMTR1Q8N1G2 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC28.15■■■□□ 2.1
CMTR1Q8N1G2 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC28.15■■■□□ 2.1
CMTR1Q8N1G2 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC28.14■■■□□ 2.1
CMTR1Q8N1G2 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
CMTR1Q8N1G2 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC28.14■■■□□ 2.1
CMTR1Q8N1G2 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
CMTR1Q8N1G2 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CMTR1Q8N1G2 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
CMTR1Q8N1G2 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC28.13■■■□□ 2.09
CMTR1Q8N1G2 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CMTR1Q8N1G2 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
CMTR1Q8N1G2 HES4-204ENST00000484667 667 ntTSL 3 BASIC28.12■■■□□ 2.09
CMTR1Q8N1G2 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
CMTR1Q8N1G2 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC28.12■■■□□ 2.09
CMTR1Q8N1G2 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC28.11■■■□□ 2.09
CMTR1Q8N1G2 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
CMTR1Q8N1G2 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC28.11■■■□□ 2.09
CMTR1Q8N1G2 SPCS2P3-201ENST00000500401 656 ntBASIC28.11■■■□□ 2.09
CMTR1Q8N1G2 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC28.11■■■□□ 2.09
CMTR1Q8N1G2 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
CMTR1Q8N1G2 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
CMTR1Q8N1G2 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC28.11■■■□□ 2.09
CMTR1Q8N1G2 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
CMTR1Q8N1G2 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC28.1■■■□□ 2.09
CMTR1Q8N1G2 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC28.1■■■□□ 2.09
CMTR1Q8N1G2 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC28.1■■■□□ 2.09
CMTR1Q8N1G2 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
CMTR1Q8N1G2 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
CMTR1Q8N1G2 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC28.09■■■□□ 2.09
CMTR1Q8N1G2 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC28.09■■■□□ 2.09
CMTR1Q8N1G2 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
CMTR1Q8N1G2 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
CMTR1Q8N1G2 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC28.09■■■□□ 2.09
CMTR1Q8N1G2 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC28.08■■■□□ 2.09
CMTR1Q8N1G2 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC28.08■■■□□ 2.09
CMTR1Q8N1G2 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.08
CMTR1Q8N1G2 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
CMTR1Q8N1G2 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
CMTR1Q8N1G2 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC28.06■■■□□ 2.08
CMTR1Q8N1G2 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
CMTR1Q8N1G2 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC28.06■■■□□ 2.08
CMTR1Q8N1G2 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC28.06■■■□□ 2.08
CMTR1Q8N1G2 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC28.06■■■□□ 2.08
CMTR1Q8N1G2 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
CMTR1Q8N1G2 AC129492.7-201ENST00000622992 756 ntBASIC28.05■■■□□ 2.08
CMTR1Q8N1G2 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC28.04■■■□□ 2.08
CMTR1Q8N1G2 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC28.04■■■□□ 2.08
CMTR1Q8N1G2 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC28.04■■■□□ 2.08
CMTR1Q8N1G2 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC28.03■■■□□ 2.08
CMTR1Q8N1G2 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
CMTR1Q8N1G2 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
CMTR1Q8N1G2 AC096887.2-201ENST00000623443 1957 ntBASIC28.02■■■□□ 2.08
CMTR1Q8N1G2 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC28.02■■■□□ 2.08
CMTR1Q8N1G2 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
CMTR1Q8N1G2 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CMTR1Q8N1G2 DUX4L9-201ENST00000449051 1259 ntBASIC28.02■■■□□ 2.08
CMTR1Q8N1G2 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC28.02■■■□□ 2.08
CMTR1Q8N1G2 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
CMTR1Q8N1G2 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC28.02■■■□□ 2.08
CMTR1Q8N1G2 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CMTR1Q8N1G2 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC28.01■■■□□ 2.08
CMTR1Q8N1G2 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC28.01■■■□□ 2.07
CMTR1Q8N1G2 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC28.01■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms