Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VPS13BQ7Z7G8 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VPS13BQ7Z7G8 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VPS13BQ7Z7G8 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
VPS13BQ7Z7G8 AC022616.5-201ENST00000518796 181 ntBASIC15.2■□□□□ 0.02
VPS13BQ7Z7G8 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC15.2■□□□□ 0.02
VPS13BQ7Z7G8 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC15.2■□□□□ 0.02
VPS13BQ7Z7G8 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
VPS13BQ7Z7G8 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
VPS13BQ7Z7G8 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC15.19■□□□□ 0.02
VPS13BQ7Z7G8 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
VPS13BQ7Z7G8 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VPS13BQ7Z7G8 WHAMMP3-201ENST00000611636 1609 ntBASIC15.19■□□□□ 0.02
VPS13BQ7Z7G8 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VPS13BQ7Z7G8 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VPS13BQ7Z7G8 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
VPS13BQ7Z7G8 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC15.18■□□□□ 0.02
VPS13BQ7Z7G8 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC15.18■□□□□ 0.02
VPS13BQ7Z7G8 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC15.18■□□□□ 0.02
VPS13BQ7Z7G8 MTX2-204ENST00000443241 799 ntTSL 3 BASIC15.18■□□□□ 0.02
VPS13BQ7Z7G8 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
VPS13BQ7Z7G8 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VPS13BQ7Z7G8 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VPS13BQ7Z7G8 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
VPS13BQ7Z7G8 RARRES2P6-201ENST00000567333 442 ntBASIC15.17■□□□□ 0.02
VPS13BQ7Z7G8 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
VPS13BQ7Z7G8 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC15.17■□□□□ 0.02
VPS13BQ7Z7G8 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
VPS13BQ7Z7G8 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
VPS13BQ7Z7G8 AL359504.2-201ENST00000605506 1601 ntBASIC15.17■□□□□ 0.02
VPS13BQ7Z7G8 ST7-202ENST00000323984 2142 ntTSL 5 BASIC15.16■□□□□ 0.02
VPS13BQ7Z7G8 ST7-207ENST00000393449 2127 ntTSL 5 BASIC15.16■□□□□ 0.02
VPS13BQ7Z7G8 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VPS13BQ7Z7G8 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC15.16■□□□□ 0.02
VPS13BQ7Z7G8 KRT125P-201ENST00000546827 989 ntBASIC15.16■□□□□ 0.02
VPS13BQ7Z7G8 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
VPS13BQ7Z7G8 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
VPS13BQ7Z7G8 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VPS13BQ7Z7G8 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC15.16■□□□□ 0.02
VPS13BQ7Z7G8 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC15.16■□□□□ 0.02
VPS13BQ7Z7G8 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC15.15■□□□□ 0.02
VPS13BQ7Z7G8 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
VPS13BQ7Z7G8 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VPS13BQ7Z7G8 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC15.15■□□□□ 0.02
VPS13BQ7Z7G8 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
VPS13BQ7Z7G8 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VPS13BQ7Z7G8 NALT1-201ENST00000429224 738 ntTSL 5 BASIC15.14■□□□□ 0.01
VPS13BQ7Z7G8 AC005837.3-201ENST00000612163 286 ntBASIC15.14■□□□□ 0.01
VPS13BQ7Z7G8 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
VPS13BQ7Z7G8 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC15.14■□□□□ 0.01
VPS13BQ7Z7G8 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
VPS13BQ7Z7G8 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC15.14■□□□□ 0.01
VPS13BQ7Z7G8 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC15.14■□□□□ 0.01
VPS13BQ7Z7G8 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VPS13BQ7Z7G8 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC15.13■□□□□ 0.01
VPS13BQ7Z7G8 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
VPS13BQ7Z7G8 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
VPS13BQ7Z7G8 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VPS13BQ7Z7G8 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC15.13■□□□□ 0.01
VPS13BQ7Z7G8 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
VPS13BQ7Z7G8 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
VPS13BQ7Z7G8 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
VPS13BQ7Z7G8 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VPS13BQ7Z7G8 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
VPS13BQ7Z7G8 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC15.12■□□□□ 0.01
VPS13BQ7Z7G8 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
VPS13BQ7Z7G8 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
VPS13BQ7Z7G8 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
VPS13BQ7Z7G8 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VPS13BQ7Z7G8 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
VPS13BQ7Z7G8 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
VPS13BQ7Z7G8 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC15.11■□□□□ 0.01
VPS13BQ7Z7G8 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC15.11■□□□□ 0.01
VPS13BQ7Z7G8 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VPS13BQ7Z7G8 AC110285.6-201ENST00000617652 491 ntBASIC15.11■□□□□ 0.01
VPS13BQ7Z7G8 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VPS13BQ7Z7G8 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VPS13BQ7Z7G8 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
VPS13BQ7Z7G8 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VPS13BQ7Z7G8 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
VPS13BQ7Z7G8 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC15.11■□□□□ 0.01
VPS13BQ7Z7G8 AL449106.1-201ENST00000608517 1980 ntBASIC15.11■□□□□ 0.01
VPS13BQ7Z7G8 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
VPS13BQ7Z7G8 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VPS13BQ7Z7G8 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC15.1■□□□□ 0.01
VPS13BQ7Z7G8 AL117332.1-201ENST00000622628 974 ntBASIC15.1■□□□□ 0.01
VPS13BQ7Z7G8 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VPS13BQ7Z7G8 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VPS13BQ7Z7G8 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC15.1■□□□□ 0.01
VPS13BQ7Z7G8 PROC-203ENST00000409048 1586 ntTSL 5 BASIC15.1■□□□□ 0.01
VPS13BQ7Z7G8 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
VPS13BQ7Z7G8 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
VPS13BQ7Z7G8 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
VPS13BQ7Z7G8 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VPS13BQ7Z7G8 KRT16P3-201ENST00000439127 1283 ntBASIC15.09■□□□□ 0.01
VPS13BQ7Z7G8 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC15.09■□□□□ 0.01
VPS13BQ7Z7G8 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
VPS13BQ7Z7G8 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
VPS13BQ7Z7G8 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VPS13BQ7Z7G8 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms