Protein–RNA interactions for Protein: Q7Z4N2

TRPM1, Transient receptor potential cation channel subfamily M member 1, humanhuman

Predictions only

Length 1,603 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1Q7Z4N2 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
TRPM1Q7Z4N2 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
TRPM1Q7Z4N2 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
TRPM1Q7Z4N2 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
TRPM1Q7Z4N2 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
TRPM1Q7Z4N2 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC34.48■■■■□ 3.11
TRPM1Q7Z4N2 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC34.48■■■■□ 3.11
TRPM1Q7Z4N2 IDNK-203ENST00000405990 629 ntTSL 2 BASIC34.47■■■■□ 3.11
TRPM1Q7Z4N2 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC34.46■■■■□ 3.11
TRPM1Q7Z4N2 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC34.46■■■■□ 3.11
TRPM1Q7Z4N2 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC34.46■■■■□ 3.11
TRPM1Q7Z4N2 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC34.46■■■■□ 3.11
TRPM1Q7Z4N2 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
TRPM1Q7Z4N2 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC34.45■■■■□ 3.11
TRPM1Q7Z4N2 DUX4L18-201ENST00000553347 1267 ntBASIC34.45■■■■□ 3.11
TRPM1Q7Z4N2 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC34.45■■■■□ 3.1
TRPM1Q7Z4N2 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC34.44■■■■□ 3.1
TRPM1Q7Z4N2 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC34.44■■■■□ 3.1
TRPM1Q7Z4N2 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
TRPM1Q7Z4N2 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
TRPM1Q7Z4N2 PKM-203ENST00000389093 2279 ntTSL 5 BASIC34.43■■■■□ 3.1
TRPM1Q7Z4N2 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC34.43■■■■□ 3.1
TRPM1Q7Z4N2 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC34.43■■■■□ 3.1
TRPM1Q7Z4N2 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC34.42■■■■□ 3.1
TRPM1Q7Z4N2 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC34.42■■■■□ 3.1
TRPM1Q7Z4N2 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC34.42■■■■□ 3.1
TRPM1Q7Z4N2 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC34.42■■■■□ 3.1
TRPM1Q7Z4N2 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC34.41■■■■□ 3.1
TRPM1Q7Z4N2 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC34.41■■■■□ 3.1
TRPM1Q7Z4N2 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC34.41■■■■□ 3.1
TRPM1Q7Z4N2 BEX3-202ENST00000372634 753 ntTSL 2 BASIC34.41■■■■□ 3.1
TRPM1Q7Z4N2 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC34.41■■■■□ 3.1
TRPM1Q7Z4N2 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC34.41■■■■□ 3.1
TRPM1Q7Z4N2 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
TRPM1Q7Z4N2 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
TRPM1Q7Z4N2 AL121749.1-202ENST00000609313 2153 ntBASIC34.4■■■■□ 3.1
TRPM1Q7Z4N2 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
TRPM1Q7Z4N2 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC34.39■■■■□ 3.1
TRPM1Q7Z4N2 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC34.39■■■■□ 3.1
TRPM1Q7Z4N2 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC34.39■■■■□ 3.1
TRPM1Q7Z4N2 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC34.39■■■■□ 3.1
TRPM1Q7Z4N2 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC34.38■■■■□ 3.09
TRPM1Q7Z4N2 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC34.38■■■■□ 3.09
TRPM1Q7Z4N2 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC34.38■■■■□ 3.09
TRPM1Q7Z4N2 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC34.38■■■■□ 3.09
TRPM1Q7Z4N2 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC34.37■■■■□ 3.09
TRPM1Q7Z4N2 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC34.37■■■■□ 3.09
TRPM1Q7Z4N2 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC34.37■■■■□ 3.09
TRPM1Q7Z4N2 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
TRPM1Q7Z4N2 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC34.37■■■■□ 3.09
TRPM1Q7Z4N2 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC34.37■■■■□ 3.09
TRPM1Q7Z4N2 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC34.36■■■■□ 3.09
TRPM1Q7Z4N2 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
TRPM1Q7Z4N2 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC34.36■■■■□ 3.09
TRPM1Q7Z4N2 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
TRPM1Q7Z4N2 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC34.36■■■■□ 3.09
TRPM1Q7Z4N2 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC34.36■■■■□ 3.09
TRPM1Q7Z4N2 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC34.36■■■■□ 3.09
TRPM1Q7Z4N2 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
TRPM1Q7Z4N2 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
TRPM1Q7Z4N2 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC34.35■■■■□ 3.09
TRPM1Q7Z4N2 PVT1_1.1-201ENST00000615125 194 ntBASIC34.35■■■■□ 3.09
TRPM1Q7Z4N2 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC34.35■■■■□ 3.09
TRPM1Q7Z4N2 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
TRPM1Q7Z4N2 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
TRPM1Q7Z4N2 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC34.33■■■■□ 3.09
TRPM1Q7Z4N2 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC34.33■■■■□ 3.09
TRPM1Q7Z4N2 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC34.32■■■■□ 3.09
TRPM1Q7Z4N2 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
TRPM1Q7Z4N2 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC34.31■■■■□ 3.08
TRPM1Q7Z4N2 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
TRPM1Q7Z4N2 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC34.3■■■■□ 3.08
TRPM1Q7Z4N2 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC34.3■■■■□ 3.08
TRPM1Q7Z4N2 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC34.3■■■■□ 3.08
TRPM1Q7Z4N2 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC34.29■■■■□ 3.08
TRPM1Q7Z4N2 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
TRPM1Q7Z4N2 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
TRPM1Q7Z4N2 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC34.28■■■■□ 3.08
TRPM1Q7Z4N2 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC34.28■■■■□ 3.08
TRPM1Q7Z4N2 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC34.27■■■■□ 3.08
TRPM1Q7Z4N2 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
TRPM1Q7Z4N2 RARRES2P1-201ENST00000474487 481 ntBASIC34.27■■■■□ 3.08
TRPM1Q7Z4N2 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC34.27■■■■□ 3.08
TRPM1Q7Z4N2 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
TRPM1Q7Z4N2 AC087393.1-201ENST00000582896 145 ntBASIC34.26■■■■□ 3.08
TRPM1Q7Z4N2 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC34.26■■■■□ 3.08
TRPM1Q7Z4N2 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC34.26■■■■□ 3.07
TRPM1Q7Z4N2 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC34.25■■■■□ 3.07
TRPM1Q7Z4N2 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC34.25■■■■□ 3.07
TRPM1Q7Z4N2 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC34.25■■■■□ 3.07
TRPM1Q7Z4N2 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC34.25■■■■□ 3.07
TRPM1Q7Z4N2 RPS2P7-201ENST00000447334 885 ntBASIC34.25■■■■□ 3.07
TRPM1Q7Z4N2 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC34.25■■■■□ 3.07
TRPM1Q7Z4N2 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC34.24■■■■□ 3.07
TRPM1Q7Z4N2 AC139795.1-202ENST00000500444 432 ntBASIC34.24■■■■□ 3.07
TRPM1Q7Z4N2 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
TRPM1Q7Z4N2 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC34.23■■■■□ 3.07
TRPM1Q7Z4N2 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC34.23■■■■□ 3.07
TRPM1Q7Z4N2 HYI-210ENST00000486909 905 ntTSL 5 BASIC34.22■■■■□ 3.07
TRPM1Q7Z4N2 AC010980.1-201ENST00000587192 1142 ntBASIC34.22■■■■□ 3.07
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms