Protein–RNA interactions for Protein: Q7L7L0

HIST3H2A, Histone H2A type 3, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2AQ7L7L0 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.92■■□□□ 1.1
HIST3H2AQ7L7L0 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
HIST3H2AQ7L7L0 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
HIST3H2AQ7L7L0 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
HIST3H2AQ7L7L0 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
HIST3H2AQ7L7L0 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
HIST3H2AQ7L7L0 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HIST3H2AQ7L7L0 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
HIST3H2AQ7L7L0 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HIST3H2AQ7L7L0 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
HIST3H2AQ7L7L0 MIR639-201ENST00000384974 98 ntBASIC21.91■■□□□ 1.1
HIST3H2AQ7L7L0 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
HIST3H2AQ7L7L0 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.91■■□□□ 1.1
HIST3H2AQ7L7L0 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
HIST3H2AQ7L7L0 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HIST3H2AQ7L7L0 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.1
HIST3H2AQ7L7L0 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
HIST3H2AQ7L7L0 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.89■■□□□ 1.09
HIST3H2AQ7L7L0 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
HIST3H2AQ7L7L0 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.09
HIST3H2AQ7L7L0 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.89■■□□□ 1.09
HIST3H2AQ7L7L0 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HIST3H2AQ7L7L0 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HIST3H2AQ7L7L0 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HIST3H2AQ7L7L0 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.88■■□□□ 1.09
HIST3H2AQ7L7L0 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
HIST3H2AQ7L7L0 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
HIST3H2AQ7L7L0 AC010501.1-201ENST00000606270 1962 ntBASIC21.88■■□□□ 1.09
HIST3H2AQ7L7L0 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HIST3H2AQ7L7L0 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HIST3H2AQ7L7L0 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HIST3H2AQ7L7L0 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
HIST3H2AQ7L7L0 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.87■■□□□ 1.09
HIST3H2AQ7L7L0 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HIST3H2AQ7L7L0 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HIST3H2AQ7L7L0 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
HIST3H2AQ7L7L0 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
HIST3H2AQ7L7L0 ERN1-208ENST00000606895 2068 ntBASIC21.86■■□□□ 1.09
HIST3H2AQ7L7L0 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
HIST3H2AQ7L7L0 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
HIST3H2AQ7L7L0 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.86■■□□□ 1.09
HIST3H2AQ7L7L0 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.86■■□□□ 1.09
HIST3H2AQ7L7L0 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
HIST3H2AQ7L7L0 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
HIST3H2AQ7L7L0 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
HIST3H2AQ7L7L0 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.86■■□□□ 1.09
HIST3H2AQ7L7L0 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.85■■□□□ 1.09
HIST3H2AQ7L7L0 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HIST3H2AQ7L7L0 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.85■■□□□ 1.09
HIST3H2AQ7L7L0 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
HIST3H2AQ7L7L0 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
HIST3H2AQ7L7L0 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
HIST3H2AQ7L7L0 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.84■■□□□ 1.09
HIST3H2AQ7L7L0 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.84■■□□□ 1.09
HIST3H2AQ7L7L0 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HIST3H2AQ7L7L0 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HIST3H2AQ7L7L0 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
HIST3H2AQ7L7L0 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
HIST3H2AQ7L7L0 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
HIST3H2AQ7L7L0 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
HIST3H2AQ7L7L0 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.83■■□□□ 1.08
HIST3H2AQ7L7L0 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
HIST3H2AQ7L7L0 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HIST3H2AQ7L7L0 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.82■■□□□ 1.08
HIST3H2AQ7L7L0 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
HIST3H2AQ7L7L0 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
HIST3H2AQ7L7L0 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.82■■□□□ 1.08
HIST3H2AQ7L7L0 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HIST3H2AQ7L7L0 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
HIST3H2AQ7L7L0 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HIST3H2AQ7L7L0 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.81■■□□□ 1.08
HIST3H2AQ7L7L0 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
HIST3H2AQ7L7L0 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HIST3H2AQ7L7L0 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.8■■□□□ 1.08
HIST3H2AQ7L7L0 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.8■■□□□ 1.08
HIST3H2AQ7L7L0 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.8■■□□□ 1.08
HIST3H2AQ7L7L0 AC060814.1-201ENST00000554326 538 ntBASIC21.8■■□□□ 1.08
HIST3H2AQ7L7L0 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HIST3H2AQ7L7L0 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HIST3H2AQ7L7L0 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.8■■□□□ 1.08
HIST3H2AQ7L7L0 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HIST3H2AQ7L7L0 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.79■■□□□ 1.08
HIST3H2AQ7L7L0 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.79■■□□□ 1.08
HIST3H2AQ7L7L0 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.79■■□□□ 1.08
HIST3H2AQ7L7L0 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HIST3H2AQ7L7L0 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HIST3H2AQ7L7L0 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HIST3H2AQ7L7L0 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HIST3H2AQ7L7L0 AC020928.2-201ENST00000588717 2197 ntBASIC21.78■■□□□ 1.08
HIST3H2AQ7L7L0 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HIST3H2AQ7L7L0 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HIST3H2AQ7L7L0 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HIST3H2AQ7L7L0 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
HIST3H2AQ7L7L0 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HIST3H2AQ7L7L0 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HIST3H2AQ7L7L0 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HIST3H2AQ7L7L0 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
HIST3H2AQ7L7L0 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HIST3H2AQ7L7L0 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.77■■□□□ 1.08
HIST3H2AQ7L7L0 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms