Protein–RNA interactions for Protein: Q71RC9

SMIM5, Small integral membrane protein 5, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM5Q71RC9 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
SMIM5Q71RC9 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
SMIM5Q71RC9 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC31.16■■■□□ 2.58
SMIM5Q71RC9 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
SMIM5Q71RC9 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC31.16■■■□□ 2.58
SMIM5Q71RC9 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC31.15■■■□□ 2.58
SMIM5Q71RC9 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC31.15■■■□□ 2.58
SMIM5Q71RC9 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
SMIM5Q71RC9 KRT125P-201ENST00000546827 989 ntBASIC31.14■■■□□ 2.58
SMIM5Q71RC9 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
SMIM5Q71RC9 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC31.13■■■□□ 2.57
SMIM5Q71RC9 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC31.13■■■□□ 2.57
SMIM5Q71RC9 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
SMIM5Q71RC9 KRT16P3-201ENST00000439127 1283 ntBASIC31.12■■■□□ 2.57
SMIM5Q71RC9 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC31.12■■■□□ 2.57
SMIM5Q71RC9 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC31.12■■■□□ 2.57
SMIM5Q71RC9 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
SMIM5Q71RC9 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
SMIM5Q71RC9 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
SMIM5Q71RC9 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
SMIM5Q71RC9 TSPY9P-201ENST00000440215 945 ntBASIC31.11■■■□□ 2.57
SMIM5Q71RC9 TSPY11P-201ENST00000442607 1045 ntBASIC31.11■■■□□ 2.57
SMIM5Q71RC9 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
SMIM5Q71RC9 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC31.11■■■□□ 2.57
SMIM5Q71RC9 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC31.11■■■□□ 2.57
SMIM5Q71RC9 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
SMIM5Q71RC9 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
SMIM5Q71RC9 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC31.1■■■□□ 2.57
SMIM5Q71RC9 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
SMIM5Q71RC9 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC31.1■■■□□ 2.57
SMIM5Q71RC9 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC31.1■■■□□ 2.57
SMIM5Q71RC9 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
SMIM5Q71RC9 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
SMIM5Q71RC9 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC31.09■■■□□ 2.57
SMIM5Q71RC9 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC31.09■■■□□ 2.57
SMIM5Q71RC9 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC31.09■■■□□ 2.57
SMIM5Q71RC9 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
SMIM5Q71RC9 RALB-208ENST00000631312 311 ntTSL 5 BASIC31.09■■■□□ 2.57
SMIM5Q71RC9 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC31.08■■■□□ 2.57
SMIM5Q71RC9 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
SMIM5Q71RC9 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
SMIM5Q71RC9 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC31.08■■■□□ 2.57
SMIM5Q71RC9 BX664725.1-201ENST00000438252 379 ntBASIC31.08■■■□□ 2.57
SMIM5Q71RC9 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC31.08■■■□□ 2.57
SMIM5Q71RC9 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC31.08■■■□□ 2.57
SMIM5Q71RC9 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC31.08■■■□□ 2.57
SMIM5Q71RC9 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC31.07■■■□□ 2.56
SMIM5Q71RC9 TRIR-202ENST00000588213 841 ntTSL 3 BASIC31.07■■■□□ 2.56
SMIM5Q71RC9 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
SMIM5Q71RC9 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC31.06■■■□□ 2.56
SMIM5Q71RC9 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC31.06■■■□□ 2.56
SMIM5Q71RC9 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC31.06■■■□□ 2.56
SMIM5Q71RC9 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC31.05■■■□□ 2.56
SMIM5Q71RC9 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC31.05■■■□□ 2.56
SMIM5Q71RC9 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC31.05■■■□□ 2.56
SMIM5Q71RC9 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
SMIM5Q71RC9 ABCB10P1-201ENST00000614297 2181 ntBASIC31.05■■■□□ 2.56
SMIM5Q71RC9 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
SMIM5Q71RC9 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
SMIM5Q71RC9 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC31.03■■■□□ 2.56
SMIM5Q71RC9 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC31.03■■■□□ 2.56
SMIM5Q71RC9 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
SMIM5Q71RC9 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC31.02■■■□□ 2.56
SMIM5Q71RC9 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
SMIM5Q71RC9 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
SMIM5Q71RC9 NALT1-201ENST00000429224 738 ntTSL 5 BASIC31.02■■■□□ 2.56
SMIM5Q71RC9 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC31.02■■■□□ 2.56
SMIM5Q71RC9 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC31.02■■■□□ 2.56
SMIM5Q71RC9 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC31.02■■■□□ 2.56
SMIM5Q71RC9 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
SMIM5Q71RC9 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
SMIM5Q71RC9 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC31.01■■■□□ 2.55
SMIM5Q71RC9 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC31■■■□□ 2.55
SMIM5Q71RC9 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
SMIM5Q71RC9 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC31■■■□□ 2.55
SMIM5Q71RC9 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
SMIM5Q71RC9 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC30.99■■■□□ 2.55
SMIM5Q71RC9 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC30.99■■■□□ 2.55
SMIM5Q71RC9 AC131281.2-201ENST00000520478 145 ntBASIC30.99■■■□□ 2.55
SMIM5Q71RC9 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC30.98■■■□□ 2.55
SMIM5Q71RC9 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC30.98■■■□□ 2.55
SMIM5Q71RC9 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC30.98■■■□□ 2.55
SMIM5Q71RC9 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
SMIM5Q71RC9 AL139246.5-201ENST00000606645 996 ntBASIC30.98■■■□□ 2.55
SMIM5Q71RC9 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC30.98■■■□□ 2.55
SMIM5Q71RC9 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC30.97■■■□□ 2.55
SMIM5Q71RC9 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC30.97■■■□□ 2.55
SMIM5Q71RC9 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
SMIM5Q71RC9 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
SMIM5Q71RC9 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
SMIM5Q71RC9 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC30.95■■■□□ 2.55
SMIM5Q71RC9 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
SMIM5Q71RC9 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC30.95■■■□□ 2.55
SMIM5Q71RC9 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC30.95■■■□□ 2.54
SMIM5Q71RC9 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.54
SMIM5Q71RC9 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC30.94■■■□□ 2.54
SMIM5Q71RC9 KRT18P24-201ENST00000344739 1156 ntBASIC30.94■■■□□ 2.54
SMIM5Q71RC9 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
SMIM5Q71RC9 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC30.93■■■□□ 2.54
SMIM5Q71RC9 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms