Protein–RNA interactions for Protein: Q6PJ21

SPSB3, SPRY domain-containing SOCS box protein 3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3Q6PJ21 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPSB3Q6PJ21 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.44■□□□□ 0.7
SPSB3Q6PJ21 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.44■□□□□ 0.7
SPSB3Q6PJ21 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
SPSB3Q6PJ21 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPSB3Q6PJ21 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPSB3Q6PJ21 ZNRF2P2-203ENST00000454624 420 ntBASIC19.44■□□□□ 0.7
SPSB3Q6PJ21 DUX4L13-201ENST00000554103 1267 ntBASIC19.44■□□□□ 0.7
SPSB3Q6PJ21 DUX4L15-201ENST00000611059 1267 ntBASIC19.44■□□□□ 0.7
SPSB3Q6PJ21 DUX4L23-201ENST00000615195 1269 ntBASIC19.44■□□□□ 0.7
SPSB3Q6PJ21 DUX4L24-201ENST00000617576 1269 ntBASIC19.44■□□□□ 0.7
SPSB3Q6PJ21 DUX4L22-201ENST00000618238 1269 ntBASIC19.44■□□□□ 0.7
SPSB3Q6PJ21 DUX4L20-201ENST00000619712 1269 ntBASIC19.44■□□□□ 0.7
SPSB3Q6PJ21 DUX4L21-201ENST00000622058 1269 ntBASIC19.44■□□□□ 0.7
SPSB3Q6PJ21 DUX4L10-201ENST00000622460 1267 ntBASIC19.44■□□□□ 0.7
SPSB3Q6PJ21 DUX4L25-201ENST00000624915 1269 ntBASIC19.44■□□□□ 0.7
SPSB3Q6PJ21 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPSB3Q6PJ21 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
SPSB3Q6PJ21 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SPSB3Q6PJ21 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPSB3Q6PJ21 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPSB3Q6PJ21 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPSB3Q6PJ21 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
SPSB3Q6PJ21 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC19.43■□□□□ 0.7
SPSB3Q6PJ21 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SPSB3Q6PJ21 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SPSB3Q6PJ21 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SPSB3Q6PJ21 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPSB3Q6PJ21 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SPSB3Q6PJ21 DUX4L11-201ENST00000611504 1267 ntBASIC19.42■□□□□ 0.7
SPSB3Q6PJ21 DUX4L12-201ENST00000614593 1267 ntBASIC19.42■□□□□ 0.7
SPSB3Q6PJ21 DUX4L14-201ENST00000621227 1267 ntBASIC19.42■□□□□ 0.7
SPSB3Q6PJ21 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPSB3Q6PJ21 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPSB3Q6PJ21 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SPSB3Q6PJ21 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPSB3Q6PJ21 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SPSB3Q6PJ21 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC19.41■□□□□ 0.7
SPSB3Q6PJ21 RPS2-210ENST00000530225 765 ntTSL 2 BASIC19.41■□□□□ 0.7
SPSB3Q6PJ21 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SPSB3Q6PJ21 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPSB3Q6PJ21 AC138932.3-201ENST00000567634 1902 ntBASIC19.41■□□□□ 0.7
SPSB3Q6PJ21 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPSB3Q6PJ21 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPSB3Q6PJ21 AGPS-202ENST00000409888 815 ntTSL 4 BASIC19.4■□□□□ 0.7
SPSB3Q6PJ21 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SPSB3Q6PJ21 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SPSB3Q6PJ21 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SPSB3Q6PJ21 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SPSB3Q6PJ21 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SPSB3Q6PJ21 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SPSB3Q6PJ21 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SPSB3Q6PJ21 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SPSB3Q6PJ21 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SPSB3Q6PJ21 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.38■□□□□ 0.69
SPSB3Q6PJ21 ABHD17AP4-201ENST00000411545 909 ntBASIC19.38■□□□□ 0.69
SPSB3Q6PJ21 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SPSB3Q6PJ21 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SPSB3Q6PJ21 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC19.38■□□□□ 0.69
SPSB3Q6PJ21 AC008813.1-201ENST00000536597 885 ntBASIC19.38■□□□□ 0.69
SPSB3Q6PJ21 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC19.38■□□□□ 0.69
SPSB3Q6PJ21 AC068473.5-201ENST00000616428 2072 ntBASIC19.38■□□□□ 0.69
SPSB3Q6PJ21 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.38■□□□□ 0.69
SPSB3Q6PJ21 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SPSB3Q6PJ21 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.37■□□□□ 0.69
SPSB3Q6PJ21 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC19.37■□□□□ 0.69
SPSB3Q6PJ21 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPSB3Q6PJ21 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SPSB3Q6PJ21 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPSB3Q6PJ21 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPSB3Q6PJ21 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.37■□□□□ 0.69
SPSB3Q6PJ21 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPSB3Q6PJ21 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPSB3Q6PJ21 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPSB3Q6PJ21 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SPSB3Q6PJ21 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SPSB3Q6PJ21 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.36■□□□□ 0.69
SPSB3Q6PJ21 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPSB3Q6PJ21 LINC00543-201ENST00000567234 1845 ntBASIC19.35■□□□□ 0.69
SPSB3Q6PJ21 AC022211.4-201ENST00000625094 2161 ntBASIC19.35■□□□□ 0.69
SPSB3Q6PJ21 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPSB3Q6PJ21 CHST11-202ENST00000546689 756 ntTSL 2 BASIC19.35■□□□□ 0.69
SPSB3Q6PJ21 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPSB3Q6PJ21 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPSB3Q6PJ21 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPSB3Q6PJ21 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SPSB3Q6PJ21 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
SPSB3Q6PJ21 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
SPSB3Q6PJ21 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SPSB3Q6PJ21 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SPSB3Q6PJ21 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SPSB3Q6PJ21 AC079834.2-201ENST00000609776 1949 ntBASIC19.33■□□□□ 0.69
SPSB3Q6PJ21 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
SPSB3Q6PJ21 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC19.33■□□□□ 0.68
SPSB3Q6PJ21 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC19.33■□□□□ 0.68
SPSB3Q6PJ21 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SPSB3Q6PJ21 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
SPSB3Q6PJ21 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.33■□□□□ 0.68
SPSB3Q6PJ21 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPSB3Q6PJ21 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms