Protein–RNA interactions for Protein: Q59GN2

RPL39P5, Putative 60S ribosomal protein L39-like 5, humanhuman

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P5Q59GN2 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC19.78■□□□□ 0.76
RPL39P5Q59GN2 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
RPL39P5Q59GN2 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPL39P5Q59GN2 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.78■□□□□ 0.76
RPL39P5Q59GN2 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC19.78■□□□□ 0.76
RPL39P5Q59GN2 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPL39P5Q59GN2 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPL39P5Q59GN2 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RPL39P5Q59GN2 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RPL39P5Q59GN2 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPL39P5Q59GN2 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RPL39P5Q59GN2 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RPL39P5Q59GN2 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RPL39P5Q59GN2 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
RPL39P5Q59GN2 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RPL39P5Q59GN2 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RPL39P5Q59GN2 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPL39P5Q59GN2 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPL39P5Q59GN2 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPL39P5Q59GN2 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPL39P5Q59GN2 MIR639-201ENST00000384974 98 ntBASIC19.76■□□□□ 0.75
RPL39P5Q59GN2 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
RPL39P5Q59GN2 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
RPL39P5Q59GN2 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.76■□□□□ 0.75
RPL39P5Q59GN2 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
RPL39P5Q59GN2 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
RPL39P5Q59GN2 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.75■□□□□ 0.75
RPL39P5Q59GN2 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPL39P5Q59GN2 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RPL39P5Q59GN2 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPL39P5Q59GN2 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.74■□□□□ 0.75
RPL39P5Q59GN2 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RPL39P5Q59GN2 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RPL39P5Q59GN2 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
RPL39P5Q59GN2 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.73■□□□□ 0.75
RPL39P5Q59GN2 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPL39P5Q59GN2 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RPL39P5Q59GN2 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RPL39P5Q59GN2 AC096887.2-201ENST00000623443 1957 ntBASIC19.73■□□□□ 0.75
RPL39P5Q59GN2 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
RPL39P5Q59GN2 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPL39P5Q59GN2 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
RPL39P5Q59GN2 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
RPL39P5Q59GN2 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RPL39P5Q59GN2 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPL39P5Q59GN2 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.72■□□□□ 0.75
RPL39P5Q59GN2 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPL39P5Q59GN2 AL157400.5-201ENST00000507624 621 ntBASIC19.72■□□□□ 0.75
RPL39P5Q59GN2 AC060814.1-201ENST00000554326 538 ntBASIC19.72■□□□□ 0.75
RPL39P5Q59GN2 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC19.72■□□□□ 0.75
RPL39P5Q59GN2 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.72■□□□□ 0.75
RPL39P5Q59GN2 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPL39P5Q59GN2 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPL39P5Q59GN2 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RPL39P5Q59GN2 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPL39P5Q59GN2 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC19.71■□□□□ 0.75
RPL39P5Q59GN2 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.71■□□□□ 0.75
RPL39P5Q59GN2 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RPL39P5Q59GN2 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.71■□□□□ 0.75
RPL39P5Q59GN2 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPL39P5Q59GN2 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPL39P5Q59GN2 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPL39P5Q59GN2 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPL39P5Q59GN2 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPL39P5Q59GN2 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPL39P5Q59GN2 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPL39P5Q59GN2 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.69■□□□□ 0.74
RPL39P5Q59GN2 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.69■□□□□ 0.74
RPL39P5Q59GN2 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RPL39P5Q59GN2 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RPL39P5Q59GN2 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
RPL39P5Q59GN2 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.68■□□□□ 0.74
RPL39P5Q59GN2 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.68■□□□□ 0.74
RPL39P5Q59GN2 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.68■□□□□ 0.74
RPL39P5Q59GN2 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.68■□□□□ 0.74
RPL39P5Q59GN2 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RPL39P5Q59GN2 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RPL39P5Q59GN2 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RPL39P5Q59GN2 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
RPL39P5Q59GN2 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.67■□□□□ 0.74
RPL39P5Q59GN2 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RPL39P5Q59GN2 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RPL39P5Q59GN2 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RPL39P5Q59GN2 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPL39P5Q59GN2 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPL39P5Q59GN2 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPL39P5Q59GN2 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.66■□□□□ 0.74
RPL39P5Q59GN2 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.66■□□□□ 0.74
RPL39P5Q59GN2 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPL39P5Q59GN2 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
RPL39P5Q59GN2 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RPL39P5Q59GN2 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.65■□□□□ 0.74
RPL39P5Q59GN2 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RPL39P5Q59GN2 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPL39P5Q59GN2 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPL39P5Q59GN2 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPL39P5Q59GN2 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RPL39P5Q59GN2 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
RPL39P5Q59GN2 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
RPL39P5Q59GN2 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms