Protein–RNA interactions for Protein: P78345

RPP38, Ribonuclease P protein subunit p38, humanhuman

Known RBP Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP38P78345 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
RPP38P78345 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
RPP38P78345 BRD4-212ENST00000630599 726 ntTSL 2 BASIC22.76■■□□□ 1.23
RPP38P78345 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
RPP38P78345 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
RPP38P78345 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
RPP38P78345 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
RPP38P78345 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
RPP38P78345 ECEL1P2-201ENST00000461596 1295 ntBASIC22.74■■□□□ 1.23
RPP38P78345 AC092296.2-201ENST00000589470 999 ntBASIC22.74■■□□□ 1.23
RPP38P78345 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
RPP38P78345 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
RPP38P78345 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.73■■□□□ 1.23
RPP38P78345 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC22.73■■□□□ 1.23
RPP38P78345 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
RPP38P78345 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
RPP38P78345 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.73■■□□□ 1.23
RPP38P78345 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RPP38P78345 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RPP38P78345 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RPP38P78345 RARRES2P2-201ENST00000394842 485 ntBASIC22.72■■□□□ 1.23
RPP38P78345 REST-210ENST00000638187 1334 ntTSL 5 BASIC22.72■■□□□ 1.23
RPP38P78345 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RPP38P78345 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC22.72■■□□□ 1.23
RPP38P78345 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
RPP38P78345 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC22.71■■□□□ 1.23
RPP38P78345 AP004609.3-201ENST00000610705 1884 ntBASIC22.71■■□□□ 1.23
RPP38P78345 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RPP38P78345 SNAI3-AS1-204ENST00000567997 2048 ntBASIC22.71■■□□□ 1.23
RPP38P78345 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
RPP38P78345 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RPP38P78345 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RPP38P78345 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
RPP38P78345 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
RPP38P78345 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC22.7■■□□□ 1.22
RPP38P78345 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
RPP38P78345 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
RPP38P78345 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
RPP38P78345 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC22.7■■□□□ 1.22
RPP38P78345 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
RPP38P78345 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
RPP38P78345 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
RPP38P78345 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC22.7■■□□□ 1.22
RPP38P78345 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
RPP38P78345 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
RPP38P78345 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
RPP38P78345 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.69■■□□□ 1.22
RPP38P78345 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RPP38P78345 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RPP38P78345 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
RPP38P78345 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
RPP38P78345 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RPP38P78345 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC22.67■■□□□ 1.22
RPP38P78345 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
RPP38P78345 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
RPP38P78345 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC22.67■■□□□ 1.22
RPP38P78345 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RPP38P78345 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RPP38P78345 AL157400.5-201ENST00000507624 621 ntBASIC22.66■■□□□ 1.22
RPP38P78345 MOB2-207ENST00000614710 705 ntTSL 5 BASIC22.66■■□□□ 1.22
RPP38P78345 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RPP38P78345 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RPP38P78345 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
RPP38P78345 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RPP38P78345 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC22.65■■□□□ 1.22
RPP38P78345 CEBPA-AS1-201ENST00000592982 2198 ntBASIC22.65■■□□□ 1.22
RPP38P78345 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RPP38P78345 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RPP38P78345 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
RPP38P78345 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC22.65■■□□□ 1.22
RPP38P78345 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RPP38P78345 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
RPP38P78345 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
RPP38P78345 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.22
RPP38P78345 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RPP38P78345 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
RPP38P78345 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RPP38P78345 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RPP38P78345 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.21
RPP38P78345 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC22.64■■□□□ 1.21
RPP38P78345 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC22.64■■□□□ 1.21
RPP38P78345 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
RPP38P78345 SMPD5-203ENST00000639008 1464 ntBASIC22.63■■□□□ 1.21
RPP38P78345 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC22.63■■□□□ 1.21
RPP38P78345 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
RPP38P78345 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RPP38P78345 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
RPP38P78345 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC22.62■■□□□ 1.21
RPP38P78345 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RPP38P78345 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RPP38P78345 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RPP38P78345 ABHD17AP5-201ENST00000580133 923 ntBASIC22.61■■□□□ 1.21
RPP38P78345 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC22.61■■□□□ 1.21
RPP38P78345 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RPP38P78345 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC22.6■■□□□ 1.21
RPP38P78345 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC22.6■■□□□ 1.21
RPP38P78345 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
RPP38P78345 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RPP38P78345 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RPP38P78345 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms