Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
CLDN20P56880 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
CLDN20P56880 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
CLDN20P56880 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CLDN20P56880 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
CLDN20P56880 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CLDN20P56880 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.07■■□□□ 1.12
CLDN20P56880 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC22.07■■□□□ 1.12
CLDN20P56880 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
CLDN20P56880 PFN2-211ENST00000489155 636 ntTSL 4 BASIC22.07■■□□□ 1.12
CLDN20P56880 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CLDN20P56880 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CLDN20P56880 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CLDN20P56880 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC22.07■■□□□ 1.12
CLDN20P56880 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC22.06■■□□□ 1.12
CLDN20P56880 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
CLDN20P56880 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CLDN20P56880 AP004609.3-201ENST00000610705 1884 ntBASIC22.06■■□□□ 1.12
CLDN20P56880 AC093323.1-202ENST00000635031 2045 ntBASIC22.06■■□□□ 1.12
CLDN20P56880 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
CLDN20P56880 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CLDN20P56880 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
CLDN20P56880 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
CLDN20P56880 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
CLDN20P56880 RP9P-202ENST00000450133 1212 ntBASIC22.05■■□□□ 1.12
CLDN20P56880 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
CLDN20P56880 NTF6A-201ENST00000591175 560 ntBASIC22.05■■□□□ 1.12
CLDN20P56880 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CLDN20P56880 AC020928.2-201ENST00000588717 2197 ntBASIC22.05■■□□□ 1.12
CLDN20P56880 AC091060.1-201ENST00000623524 1766 ntBASIC22.04■■□□□ 1.12
CLDN20P56880 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.04■■□□□ 1.12
CLDN20P56880 MIR3960-201ENST00000583311 91 ntBASIC22.04■■□□□ 1.12
CLDN20P56880 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CLDN20P56880 AC142472.1-201ENST00000612013 1741 ntBASIC22.03■■□□□ 1.12
CLDN20P56880 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
CLDN20P56880 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CLDN20P56880 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC22.03■■□□□ 1.12
CLDN20P56880 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC22.03■■□□□ 1.12
CLDN20P56880 AC093536.1-201ENST00000569153 554 ntBASIC22.03■■□□□ 1.12
CLDN20P56880 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CLDN20P56880 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CLDN20P56880 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
CLDN20P56880 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
CLDN20P56880 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC22.02■■□□□ 1.12
CLDN20P56880 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CLDN20P56880 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
CLDN20P56880 AC009831.1-201ENST00000580420 1582 ntBASIC22.02■■□□□ 1.12
CLDN20P56880 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC22.02■■□□□ 1.12
CLDN20P56880 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC22.01■■□□□ 1.11
CLDN20P56880 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC22.01■■□□□ 1.11
CLDN20P56880 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
CLDN20P56880 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22.01■■□□□ 1.11
CLDN20P56880 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
CLDN20P56880 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC22.01■■□□□ 1.11
CLDN20P56880 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
CLDN20P56880 AC026202.3-201ENST00000600805 1127 ntBASIC22.01■■□□□ 1.11
CLDN20P56880 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
CLDN20P56880 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC22.01■■□□□ 1.11
CLDN20P56880 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC22■■□□□ 1.11
CLDN20P56880 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CLDN20P56880 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
CLDN20P56880 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
CLDN20P56880 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC22■■□□□ 1.11
CLDN20P56880 GFER-205ENST00000569451 517 ntTSL 5 BASIC22■■□□□ 1.11
CLDN20P56880 AC133552.2-201ENST00000619106 1032 ntBASIC22■■□□□ 1.11
CLDN20P56880 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC22■■□□□ 1.11
CLDN20P56880 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC22■■□□□ 1.11
CLDN20P56880 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC22■■□□□ 1.11
CLDN20P56880 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CLDN20P56880 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.99■■□□□ 1.11
CLDN20P56880 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CLDN20P56880 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CLDN20P56880 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
CLDN20P56880 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
CLDN20P56880 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.99■■□□□ 1.11
CLDN20P56880 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
CLDN20P56880 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.98■■□□□ 1.11
CLDN20P56880 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.98■■□□□ 1.11
CLDN20P56880 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CLDN20P56880 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CLDN20P56880 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CLDN20P56880 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CLDN20P56880 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CLDN20P56880 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CLDN20P56880 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CLDN20P56880 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CLDN20P56880 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CLDN20P56880 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CLDN20P56880 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CLDN20P56880 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CLDN20P56880 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
CLDN20P56880 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.97■■□□□ 1.11
CLDN20P56880 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
CLDN20P56880 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CLDN20P56880 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.96■■□□□ 1.11
CLDN20P56880 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
CLDN20P56880 KRT18P60-201ENST00000312876 1297 ntBASIC21.96■■□□□ 1.11
CLDN20P56880 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.96■■□□□ 1.11
CLDN20P56880 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CLDN20P56880 RAP2CP1-202ENST00000605179 643 ntBASIC21.96■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms