Protein–RNA interactions for Protein: P12956

XRCC6, X-ray repair cross-complementing protein 6, humanhuman

Known RBP eCLIP

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6P12956 IMMP2L-209ENST00000489381 856 ntTSL 55.27□□□□□ -1.572e-8■■■■□ 24.5
XRCC6P12956 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.662e-7■■■■□ 24.4
XRCC6P12956 PRSS21-208ENST00000575199 679 ntTSL 223.84■■□□□ 1.412e-7■■■■□ 24.4
XRCC6P12956 PRSS21-207ENST00000574813 873 ntTSL 321.06■□□□□ 0.962e-7■■■■□ 24.4
XRCC6P12956 PRSS21-210ENST00000577043 814 ntTSL 520.9■□□□□ 0.942e-7■■■■□ 24.4
XRCC6P12956 PRSS21-203ENST00000570594 809 ntTSL 320.28■□□□□ 0.842e-7■■■■□ 24.4
XRCC6P12956 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC19.18■□□□□ 0.662e-7■■■■□ 24.4
XRCC6P12956 PRSS21-204ENST00000570629 626 ntTSL 213.79□□□□□ -0.22e-7■■■■□ 24.4
XRCC6P12956 CKB-214ENST00000555770 816 ntTSL 429.09■■■□□ 2.254e-8■■■■□ 24.4
XRCC6P12956 SGPL1-204ENST00000486993 537 ntTSL 1 (best)22.95■■□□□ 1.264e-7■■■■□ 24.3
XRCC6P12956 SGPL1-202ENST00000373202 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.274e-7■■■■□ 24.3
XRCC6P12956 DCAF6-208ENST00000470721 2803 ntTSL 221.39■■□□□ 1.012e-6■■■■□ 24.2
XRCC6P12956 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.332e-6■■■■□ 24.2
XRCC6P12956 DCAF6-203ENST00000367843 3302 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.162e-6■■■■□ 24.2
XRCC6P12956 DCAF6-204ENST00000432587 3522 ntTSL 2 BASIC15.46■□□□□ 0.072e-6■■■■□ 24.2
XRCC6P12956 DCAF6-202ENST00000367840 3349 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.672e-6■■■■□ 24.2
XRCC6P12956 SURF4-204ENST00000465565 400 ntTSL 322.25■■□□□ 1.152e-9■■■■□ 24.1
XRCC6P12956 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC21.32■■□□□ 12e-9■■■■□ 24.1
XRCC6P12956 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC20.95■□□□□ 0.942e-9■■■■□ 24.1
XRCC6P12956 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.27■□□□□ 0.842e-9■■■■□ 24.1
XRCC6P12956 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC20.08■□□□□ 0.82e-9■■■■□ 24.1
XRCC6P12956 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.792e-9■■■■□ 24.1
XRCC6P12956 SURF4-203ENST00000371991 715 ntTSL 3 BASIC14.87□□□□□ -0.032e-9■■■■□ 24.1
XRCC6P12956 SURF4-205ENST00000467910 693 ntTSL 514.56□□□□□ -0.082e-9■■■■□ 24.1
XRCC6P12956 ETV5-203ENST00000421809 554 ntTSL 223.04■■□□□ 1.281e-11■■■■□ 24.1
XRCC6P12956 ETV5-210ENST00000476890 642 ntTSL 221.4■■□□□ 1.021e-11■■■■□ 24.1
XRCC6P12956 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.621e-11■■■■□ 24.1
XRCC6P12956 ETV5-201ENST00000306376 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 01e-11■■■■□ 24.1
XRCC6P12956 ETV5-204ENST00000422039 564 ntTSL 414.17□□□□□ -0.141e-11■■■■□ 24.1
XRCC6P12956 ETV5-207ENST00000440773 574 ntTSL 46.86□□□□□ -1.311e-11■■■■□ 24.1
XRCC6P12956 ETV5-202ENST00000413301 573 ntTSL 46.76□□□□□ -1.331e-11■■■■□ 24.1
XRCC6P12956 ETV5-208ENST00000472868 238 ntTSL 54.43□□□□□ -1.71e-11■■■■□ 24.1
XRCC6P12956 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC19.82■□□□□ 0.768e-12■■■■□ 24.1
XRCC6P12956 PPIL2-207ENST00000462188 1735 ntTSL 218.76■□□□□ 0.598e-12■■■■□ 24.1
XRCC6P12956 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.528e-12■■■■□ 24.1
XRCC6P12956 PPIL2-205ENST00000446951 1926 ntTSL 1 (best)16.78■□□□□ 0.288e-12■■■■□ 24.1
XRCC6P12956 PPIL2-201ENST00000335025 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.138e-12■■■■□ 24.1
XRCC6P12956 PPIL2-203ENST00000406385 3875 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.458e-12■■■■□ 24.1
XRCC6P12956 PPIL2-204ENST00000417788 4213 ntTSL 211.77□□□□□ -0.538e-12■■■■□ 24.1
XRCC6P12956 NDUFB11-201ENST00000276062 948 ntTSL 1 (best) BASIC14.78□□□□□ -0.041e-7■■■■□ 24
XRCC6P12956 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.121e-7■■■■□ 24
XRCC6P12956 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.338e-7■■■■□ 23.9
XRCC6P12956 CTC1-201ENST00000315684 7021 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.826e-10■■■■□ 23.9
XRCC6P12956 CABIN1-208ENST00000467937 593 ntTSL 320.76■□□□□ 0.915e-6■■■■□ 23.8
XRCC6P12956 CABIN1-203ENST00000398319 7480 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.285e-6■■■■□ 23.8
XRCC6P12956 CABIN1-201ENST00000263119 7222 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.295e-6■■■■□ 23.8
XRCC6P12956 CABIN1-204ENST00000405822 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.395e-6■■■■□ 23.8
XRCC6P12956 CABIN1-214ENST00000617531 7072 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.485e-6■■■■□ 23.8
XRCC6P12956 EZH2-210ENST00000498186 1876 ntTSL 228.63■■■□□ 2.179e-6■■■■□ 23.7
XRCC6P12956 PVT1-219ENST00000523427 938 ntTSL 3 BASIC28.61■■■□□ 2.172e-7■■■■□ 23.7
XRCC6P12956 EZH2-207ENST00000483012 1491 ntTSL 228.58■■■□□ 2.179e-6■■■■□ 23.7
XRCC6P12956 PVT1-201ENST00000504719 754 ntTSL 228.24■■■□□ 2.112e-7■■■■□ 23.7
XRCC6P12956 PVT1-204ENST00000517525 392 ntTSL 327.55■■■□□ 22e-7■■■■□ 23.7
XRCC6P12956 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC26.99■■□□□ 1.912e-7■■■■□ 23.7
XRCC6P12956 PVT1-218ENST00000523328 343 ntTSL 1 (best)25.14■■□□□ 1.622e-7■■■■□ 23.7
XRCC6P12956 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC24.62■■□□□ 1.539e-6■■■■□ 23.7
XRCC6P12956 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC23.74■■□□□ 1.392e-10■■■■□ 23.7
XRCC6P12956 HNF4A-203ENST00000372920 3340 ntTSL 1 (best)22.85■■□□□ 1.252e-10■■■■□ 23.7
XRCC6P12956 RNF168-202ENST00000437070 2202 ntTSL 222.63■■□□□ 1.218e-6■■■■□ 23.7
XRCC6P12956 KDSR-208ENST00000589530 588 ntTSL 222.28■■□□□ 1.169e-6■■■■□ 23.7
XRCC6P12956 KDSR-212ENST00000592327 553 ntTSL 421.96■■□□□ 1.119e-6■■■■□ 23.7
XRCC6P12956 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.069e-6■■■■□ 23.7
XRCC6P12956 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.92■□□□□ 0.943e-11■■■■□ 23.7
XRCC6P12956 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.869e-6■■■■□ 23.7
XRCC6P12956 IER3-202ENST00000376377 1350 ntBASIC20.34■□□□□ 0.853e-15■■■■□ 23.7
XRCC6P12956 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.829e-6■■■■□ 23.7
XRCC6P12956 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.06■□□□□ 0.82e-10■■■■□ 23.7
XRCC6P12956 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.789e-6■■■■□ 23.7
XRCC6P12956 HNF4A-207ENST00000609262 540 ntTSL 1 (best)19.6■□□□□ 0.732e-10■■■■□ 23.7
XRCC6P12956 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC19.16■□□□□ 0.669e-6■■■■□ 23.7
XRCC6P12956 PVT1-220ENST00000524165 458 ntTSL 219.13■□□□□ 0.652e-7■■■■□ 23.7
XRCC6P12956 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.619e-6■■■■□ 23.7
XRCC6P12956 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.548e-6■■■■□ 23.7
XRCC6P12956 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.529e-6■■■■□ 23.7
XRCC6P12956 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.23■□□□□ 0.519e-6■■■■□ 23.7
XRCC6P12956 RREB1-205ENST00000467782 243 ntTSL 517.92■□□□□ 0.469e-6■■■■□ 23.7
XRCC6P12956 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.393e-11■■■■□ 23.7
XRCC6P12956 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.17■□□□□ 0.342e-10■■■■□ 23.7
XRCC6P12956 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC16.69■□□□□ 0.262e-10■■■■□ 23.7
XRCC6P12956 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC16.62■□□□□ 0.259e-6■■■■□ 23.7
XRCC6P12956 QRICH1-204ENST00000424300 3009 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.29e-6■■■■□ 23.7
XRCC6P12956 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.193e-15■■■■□ 23.7
XRCC6P12956 ATXN10-201ENST00000252934 3329 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.159e-6■■■■□ 23.7
XRCC6P12956 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC15.96■□□□□ 0.159e-6■■■■□ 23.7
XRCC6P12956 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC15.38■□□□□ 0.059e-6■■■■□ 23.7
XRCC6P12956 DLEU1-231ENST00000490577 2440 ntTSL 5 BASIC15.38■□□□□ 0.059e-6■■■■□ 23.7
XRCC6P12956 RREB1-206ENST00000471433 1021 ntTSL 514.56□□□□□ -0.083e-11■■■■□ 23.7
XRCC6P12956 RREB1-209ENST00000491191 998 ntTSL 514.56□□□□□ -0.083e-11■■■■□ 23.7
XRCC6P12956 DLEU1-203ENST00000461527 917 ntTSL 1 (best) BASIC14.24□□□□□ -0.139e-6■■■■□ 23.7
XRCC6P12956 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC14.15□□□□□ -0.152e-10■■■■□ 23.7
XRCC6P12956 DLEU1-218ENST00000475913 534 ntTSL 1 (best)13.88□□□□□ -0.199e-6■■■■□ 23.7
XRCC6P12956 FCHSD2-206ENST00000422375 587 ntTSL 413.32□□□□□ -0.289e-6■■■■□ 23.7
XRCC6P12956 KDSR-203ENST00000585456 476 ntTSL 313.3□□□□□ -0.289e-6■■■■□ 23.7
XRCC6P12956 PVT1-215ENST00000522963 568 ntTSL 413.29□□□□□ -0.282e-7■■■■□ 23.7
XRCC6P12956 QRICH1-210ENST00000479449 860 ntTSL 313.29□□□□□ -0.289e-6■■■■□ 23.7
XRCC6P12956 HNF4A-209ENST00000619550 4763 ntTSL 5 BASIC13.24□□□□□ -0.292e-10■■■■□ 23.7
XRCC6P12956 DLEU1-232ENST00000491341 1141 ntTSL 5 BASIC12.94□□□□□ -0.349e-6■■■■□ 23.7
XRCC6P12956 DLEU1-208ENST00000468168 982 ntTSL 1 (best) BASIC12.91□□□□□ -0.349e-6■■■■□ 23.7
XRCC6P12956 DLEU1-219ENST00000476738 838 ntTSL 5 BASIC12.9□□□□□ -0.349e-6■■■■□ 23.7
XRCC6P12956 HNF4A-201ENST00000316099 6445 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.412e-10■■■■□ 23.7
Retrieved 100 of 6,788 protein–RNA pairs in 224.7 ms