RNA–Protein interactions for RNA: ENST00000315684.12

CTC1-201, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTC1, Length 7,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-201ENST00000315684 DCAF8L2P0C7V8 631 aa16.99■□□□□ 0.31
CTC1-201ENST00000315684 NISCHQ9Y2I1 1504 aa15.69■□□□□ 0.1
CTC1-201ENST00000315684 SHROOM4Q9ULL8 1493 aa15.49■□□□□ 0.07
CTC1-201ENST00000315684 SUPT5HO00267 1087 aaKnown RBP15.43■□□□□ 0.06
CTC1-201ENST00000315684 EHMT2Q96KQ7 1210 aa15.34■□□□□ 0.05
CTC1-201ENST00000315684 RANGAP1P46060 587 aaPredicted RBP14.75□□□□□ -0.05
CTC1-201ENST00000315684 FAM9AQ8IZU1 332 aaPredicted RBP14.68□□□□□ -0.06
CTC1-201ENST00000315684 TTBK1Q5TCY1 1321 aaPredicted RBP14.64□□□□□ -0.07
CTC1-201ENST00000315684 ATP1B4Q9UN42 357 aaPredicted RBP14.55□□□□□ -0.08
CTC1-201ENST00000315684 APLP2Q06481 763 aa14.42□□□□□ -0.1
CTC1-201ENST00000315684 ABCC9O60706 1549 aa14.38□□□□□ -0.11
CTC1-201ENST00000315684 PABPN1Q86U42 306 aaKnown RBP eCLIP14.34□□□□□ -0.11
CTC1-201ENST00000315684 MYT1LQ9UL68 1186 aa14.16□□□□□ -0.14
CTC1-201ENST00000315684 TRIM41Q8WV44 630 aa14.16□□□□□ -0.14
CTC1-201ENST00000315684 UBTFP17480 764 aaKnown RBP14.13□□□□□ -0.15
CTC1-201ENST00000315684 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.09□□□□□ -0.15
CTC1-201ENST00000315684 HNRNPUL2Q1KMD3 747 aaKnown RBP14.09□□□□□ -0.15
CTC1-201ENST00000315684 CHIC1Q5VXU3 224 aa14.08□□□□□ -0.15
CTC1-201ENST00000315684 PPARGC1BQ86YN6 1023 aaKnown RBP13.97□□□□□ -0.17
CTC1-201ENST00000315684 FBLN2P98095 1184 aa13.9□□□□□ -0.18
CTC1-201ENST00000315684 PCGF6Q9BYE7 350 aa13.88□□□□□ -0.19
CTC1-201ENST00000315684 ITGAEP38570 1179 aa13.8□□□□□ -0.2
CTC1-201ENST00000315684 PLPPR3Q6T4P5 718 aa13.63□□□□□ -0.23
CTC1-201ENST00000315684 ARID3CA6NKF2 412 aa13.61□□□□□ -0.23
CTC1-201ENST00000315684 POLR3GLQ9BT43 218 aa13.61□□□□□ -0.23
CTC1-201ENST00000315684 CCER1Q8TC90 406 aaPredicted RBP13.6□□□□□ -0.23
CTC1-201ENST00000315684 CNGB1Q14028 1251 aaPredicted RBP13.59□□□□□ -0.23
CTC1-201ENST00000315684 SLC4A1APQ9BWU0 796 aaKnown RBP13.53□□□□□ -0.24
CTC1-201ENST00000315684 LOC105371045A0A1W2PR82 267 aa13.5□□□□□ -0.25
CTC1-201ENST00000315684 SCRIBQ14160 1630 aa13.45□□□□□ -0.26
CTC1-201ENST00000315684 P3H3Q8IVL6 736 aa13.45□□□□□ -0.26
CTC1-201ENST00000315684 FAM50AQ14320 339 aaKnown RBP13.38□□□□□ -0.27
CTC1-201ENST00000315684 BCANQ96GW7 911 aa13.38□□□□□ -0.27
CTC1-201ENST00000315684 TRIM52Q96A61 297 aa13.29□□□□□ -0.28
CTC1-201ENST00000315684 ZNF777Q9ULD5 760 aaPredicted RBP13.26□□□□□ -0.29
CTC1-201ENST00000315684 YTHDC1Q96MU7 727 aaKnown RBP13.25□□□□□ -0.29
CTC1-201ENST00000315684 NPM1P06748 294 aaKnown RBP eCLIP13.2□□□□□ -0.33e-25■■■■■ 32.4
CTC1-201ENST00000315684 ZNF326Q5BKZ1 582 aaKnown RBP13.19□□□□□ -0.3
CTC1-201ENST00000315684 ESF1Q9H501 851 aaKnown RBP13.18□□□□□ -0.3
CTC1-201ENST00000315684 SENP3Q9H4L4 574 aaPredicted RBP13.17□□□□□ -0.3
CTC1-201ENST00000315684 PELP1Q8IZL8 1130 aaKnown RBP13.16□□□□□ -0.3
CTC1-201ENST00000315684 NEUROD1Q13562 356 aa13.13□□□□□ -0.31
CTC1-201ENST00000315684 SLC24A1O60721 1099 aa13.12□□□□□ -0.31
CTC1-201ENST00000315684 CHMP7Q8WUX9 453 aaPredicted RBP13.1□□□□□ -0.31
CTC1-201ENST00000315684 TRHP20396 242 aaPredicted RBP13.08□□□□□ -0.32
CTC1-201ENST00000315684 CHGAP10645 457 aaKnown RBP13.08□□□□□ -0.32
CTC1-201ENST00000315684 STAG3Q9UJ98 1225 aa13.06□□□□□ -0.32
CTC1-201ENST00000315684 ERCC6Q03468 1493 aa13.05□□□□□ -0.32
CTC1-201ENST00000315684 RB1CC1Q8TDY2 1594 aa13.04□□□□□ -0.32
CTC1-201ENST00000315684 PLEKHG5O94827 1062 aa13.04□□□□□ -0.32
CTC1-201ENST00000315684 KCNH8Q96L42 1107 aa13.01□□□□□ -0.33
CTC1-201ENST00000315684 TRIM26Q12899 539 aaPredicted RBP12.99□□□□□ -0.33
CTC1-201ENST00000315684 ZEB1P37275 1124 aaPredicted RBP12.97□□□□□ -0.33
CTC1-201ENST00000315684 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.96□□□□□ -0.336e-7■■■□□ 19.2
CTC1-201ENST00000315684 SCAF1Q9H7N4 1312 aaKnown RBP12.96□□□□□ -0.33
CTC1-201ENST00000315684 BCL11AQ9H165 835 aa12.94□□□□□ -0.34
CTC1-201ENST00000315684 ARID4BQ4LE39 1312 aaPredicted RBP12.94□□□□□ -0.34
CTC1-201ENST00000315684 CCDC180Q9P1Z9 1646 aa12.93□□□□□ -0.34
CTC1-201ENST00000315684 NEFLP07196 543 aa12.9□□□□□ -0.34
CTC1-201ENST00000315684 CDK11AQ9UQ88 783 aaPredicted RBP12.89□□□□□ -0.35
CTC1-201ENST00000315684 CSRNP3Q8WYN3 585 aa12.88□□□□□ -0.35
CTC1-201ENST00000315684 A0A0G2JS52 829 aa12.87□□□□□ -0.35
CTC1-201ENST00000315684 ERICH6Q7L0X2 663 aa12.87□□□□□ -0.35
CTC1-201ENST00000315684 CHIC2Q9UKJ5 165 aa12.86□□□□□ -0.35
CTC1-201ENST00000315684 CENPBP07199 599 aaPredicted RBP12.86□□□□□ -0.35
CTC1-201ENST00000315684 ZCCHC6Q5VYS8 1495 aaKnown RBP12.85□□□□□ -0.35
CTC1-201ENST00000315684 ZBTB7CA1YPR0 619 aa12.8□□□□□ -0.36
CTC1-201ENST00000315684 C14orf37Q86TY3 774 aa12.77□□□□□ -0.37
CTC1-201ENST00000315684 BAZ1BQ9UIG0 1483 aaKnown RBP12.76□□□□□ -0.37
CTC1-201ENST00000315684 MLECQ14165 292 aa12.74□□□□□ -0.37
CTC1-201ENST00000315684 NACADO15069 1562 aa12.72□□□□□ -0.37
CTC1-201ENST00000315684 KDM2AQ9Y2K7 1162 aa12.68□□□□□ -0.38
CTC1-201ENST00000315684 PPP1R15AO75807 674 aaPredicted RBP12.67□□□□□ -0.38
CTC1-201ENST00000315684 CECR2Q9BXF3 1484 aa12.65□□□□□ -0.38
CTC1-201ENST00000315684 TSPY4P0CV99 314 aa12.64□□□□□ -0.39
CTC1-201ENST00000315684 TSPY10P0CW01 314 aa12.64□□□□□ -0.39
CTC1-201ENST00000315684 CLSPNQ9HAW4 1339 aa12.64□□□□□ -0.39
CTC1-201ENST00000315684 HRCP23327 699 aa12.63□□□□□ -0.39
CTC1-201ENST00000315684 HAP1P54257 671 aaPredicted RBP12.62□□□□□ -0.39
CTC1-201ENST00000315684 PLEKHD1A6NEE1 506 aa12.62□□□□□ -0.39
CTC1-201ENST00000315684 NEFMP07197 916 aa12.61□□□□□ -0.39
CTC1-201ENST00000315684 MTUS2Q5JR59 1369 aa12.59□□□□□ -0.39
CTC1-201ENST00000315684 RRP7BPQ9NSQ0 103 aa12.59□□□□□ -0.39
CTC1-201ENST00000315684 EIF4G1Q04637 1599 aaKnown RBP12.59□□□□□ -0.39
CTC1-201ENST00000315684 DAXXQ9UER7 740 aaPredicted RBP12.58□□□□□ -0.4
CTC1-201ENST00000315684 LMOD2Q6P5Q4 547 aa12.56□□□□□ -0.4
CTC1-201ENST00000315684 MYT1Q01538 1121 aa12.54□□□□□ -0.4
CTC1-201ENST00000315684 RGL3Q3MIN7 710 aa12.54□□□□□ -0.4
CTC1-201ENST00000315684 CANXP27824 592 aaKnown RBP12.54□□□□□ -0.4
CTC1-201ENST00000315684 AEBP2Q6ZN18 517 aaPredicted RBP12.52□□□□□ -0.4
CTC1-201ENST00000315684 SALL2Q9Y467 1007 aaPredicted RBP12.51□□□□□ -0.41
CTC1-201ENST00000315684 CYB5RLQ6IPT4 315 aa12.5□□□□□ -0.41
CTC1-201ENST00000315684 ZBTB47Q9UFB7 747 aaPredicted RBP12.5□□□□□ -0.41
CTC1-201ENST00000315684 RSF1Q96T23 1441 aaPredicted RBP12.49□□□□□ -0.41
CTC1-201ENST00000315684 ANP32CO43423 234 aa12.48□□□□□ -0.41
CTC1-201ENST00000315684 CFDP1Q9UEE9 299 aaPredicted RBP12.46□□□□□ -0.41
CTC1-201ENST00000315684 DIEXFQ68CQ4 756 aaKnown RBP12.46□□□□□ -0.42
CTC1-201ENST00000315684 ARXQ96QS3 562 aa12.45□□□□□ -0.42
CTC1-201ENST00000315684 WRNQ14191 1432 aaPredicted RBP eCLIP12.43□□□□□ -0.422e-9■■■■■ 37.2
CTC1-201ENST00000315684 TMC1Q8TDI8 760 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms