Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DEFA4P12838 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
DEFA4P12838 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
DEFA4P12838 CR559946.2-201ENST00000623684 991 ntBASIC19.43■□□□□ 0.7
DEFA4P12838 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
DEFA4P12838 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
DEFA4P12838 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DEFA4P12838 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DEFA4P12838 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
DEFA4P12838 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DEFA4P12838 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC19.42■□□□□ 0.7
DEFA4P12838 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
DEFA4P12838 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.42■□□□□ 0.7
DEFA4P12838 MIR3648-2-201ENST00000581792 180 ntBASIC19.42■□□□□ 0.7
DEFA4P12838 MIR3648-1-201ENST00000615959 180 ntBASIC19.42■□□□□ 0.7
DEFA4P12838 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DEFA4P12838 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DEFA4P12838 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DEFA4P12838 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
DEFA4P12838 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DEFA4P12838 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DEFA4P12838 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.41■□□□□ 0.7
DEFA4P12838 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.41■□□□□ 0.7
DEFA4P12838 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DEFA4P12838 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DEFA4P12838 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC19.41■□□□□ 0.7
DEFA4P12838 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.4■□□□□ 0.7
DEFA4P12838 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DEFA4P12838 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DEFA4P12838 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
DEFA4P12838 HLA-V-202ENST00000446817 847 ntBASIC19.4■□□□□ 0.7
DEFA4P12838 MACF1-219ENST00000484793 834 ntTSL 2 BASIC19.4■□□□□ 0.7
DEFA4P12838 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.4■□□□□ 0.7
DEFA4P12838 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DEFA4P12838 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
DEFA4P12838 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
DEFA4P12838 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
DEFA4P12838 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
DEFA4P12838 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DEFA4P12838 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC19.39■□□□□ 0.69
DEFA4P12838 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
DEFA4P12838 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
DEFA4P12838 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
DEFA4P12838 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
DEFA4P12838 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DEFA4P12838 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
DEFA4P12838 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
DEFA4P12838 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
DEFA4P12838 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DEFA4P12838 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DEFA4P12838 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
DEFA4P12838 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.38■□□□□ 0.69
DEFA4P12838 AC016575.1-201ENST00000607026 382 ntBASIC19.38■□□□□ 0.69
DEFA4P12838 MIR7108-201ENST00000614319 87 ntBASIC19.38■□□□□ 0.69
DEFA4P12838 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC19.38■□□□□ 0.69
DEFA4P12838 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DEFA4P12838 SNAI3-AS1-204ENST00000567997 2048 ntBASIC19.37■□□□□ 0.69
DEFA4P12838 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
DEFA4P12838 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
DEFA4P12838 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
DEFA4P12838 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
DEFA4P12838 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DEFA4P12838 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DEFA4P12838 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
DEFA4P12838 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC19.37■□□□□ 0.69
DEFA4P12838 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
DEFA4P12838 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
DEFA4P12838 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DEFA4P12838 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
DEFA4P12838 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DEFA4P12838 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
DEFA4P12838 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
DEFA4P12838 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DEFA4P12838 AL359258.2-201ENST00000564063 1566 ntBASIC19.36■□□□□ 0.69
DEFA4P12838 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
DEFA4P12838 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
DEFA4P12838 AC126177.7-201ENST00000547904 679 ntBASIC19.36■□□□□ 0.69
DEFA4P12838 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
DEFA4P12838 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
DEFA4P12838 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
DEFA4P12838 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
DEFA4P12838 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
DEFA4P12838 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
DEFA4P12838 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
DEFA4P12838 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
DEFA4P12838 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
DEFA4P12838 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
DEFA4P12838 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
DEFA4P12838 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.34■□□□□ 0.69
DEFA4P12838 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
DEFA4P12838 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.34■□□□□ 0.69
DEFA4P12838 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
DEFA4P12838 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DEFA4P12838 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
DEFA4P12838 ERN1-208ENST00000606895 2068 ntBASIC19.34■□□□□ 0.69
DEFA4P12838 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
DEFA4P12838 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC19.34■□□□□ 0.69
DEFA4P12838 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
DEFA4P12838 METRNL-202ENST00000570778 967 ntTSL 5 BASIC19.33■□□□□ 0.68
DEFA4P12838 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms