Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
THBS1P07996 AL157400.5-201ENST00000507624 621 ntBASIC22.28■■□□□ 1.16
THBS1P07996 AC060814.1-201ENST00000554326 538 ntBASIC22.28■■□□□ 1.16
THBS1P07996 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
THBS1P07996 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
THBS1P07996 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
THBS1P07996 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC22.27■■□□□ 1.16
THBS1P07996 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
THBS1P07996 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
THBS1P07996 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
THBS1P07996 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
THBS1P07996 AC096887.2-201ENST00000623443 1957 ntBASIC22.27■■□□□ 1.15
THBS1P07996 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
THBS1P07996 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC22.26■■□□□ 1.15
THBS1P07996 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
THBS1P07996 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC22.26■■□□□ 1.15
THBS1P07996 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
THBS1P07996 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC22.25■■□□□ 1.15
THBS1P07996 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
THBS1P07996 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
THBS1P07996 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC22.25■■□□□ 1.15
THBS1P07996 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC22.25■■□□□ 1.15
THBS1P07996 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
THBS1P07996 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC22.25■■□□□ 1.15
THBS1P07996 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
THBS1P07996 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
THBS1P07996 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC22.24■■□□□ 1.15
THBS1P07996 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
THBS1P07996 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
THBS1P07996 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
THBS1P07996 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
THBS1P07996 PFN2-211ENST00000489155 636 ntTSL 4 BASIC22.24■■□□□ 1.15
THBS1P07996 AC025884.2-201ENST00000553429 711 ntBASIC22.24■■□□□ 1.15
THBS1P07996 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC22.24■■□□□ 1.15
THBS1P07996 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC22.24■■□□□ 1.15
THBS1P07996 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
THBS1P07996 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
THBS1P07996 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC22.23■■□□□ 1.15
THBS1P07996 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
THBS1P07996 TPT1-202ENST00000379055 948 ntTSL 2 BASIC22.23■■□□□ 1.15
THBS1P07996 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC22.23■■□□□ 1.15
THBS1P07996 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC22.23■■□□□ 1.15
THBS1P07996 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
THBS1P07996 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
THBS1P07996 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
THBS1P07996 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC22.22■■□□□ 1.15
THBS1P07996 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC22.22■■□□□ 1.15
THBS1P07996 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC22.22■■□□□ 1.15
THBS1P07996 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
THBS1P07996 MOB2-207ENST00000614710 705 ntTSL 5 BASIC22.22■■□□□ 1.15
THBS1P07996 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
THBS1P07996 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
THBS1P07996 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
THBS1P07996 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
THBS1P07996 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
THBS1P07996 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.21■■□□□ 1.15
THBS1P07996 AC092296.2-201ENST00000589470 999 ntBASIC22.21■■□□□ 1.15
THBS1P07996 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
THBS1P07996 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
THBS1P07996 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
THBS1P07996 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.21■■□□□ 1.15
THBS1P07996 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
THBS1P07996 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
THBS1P07996 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
THBS1P07996 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
THBS1P07996 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
THBS1P07996 SRP68-213ENST00000629930 165 ntTSL 5 BASIC22.2■■□□□ 1.14
THBS1P07996 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
THBS1P07996 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
THBS1P07996 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC22.2■■□□□ 1.14
THBS1P07996 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
THBS1P07996 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
THBS1P07996 MIR3960-201ENST00000583311 91 ntBASIC22.19■■□□□ 1.14
THBS1P07996 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
THBS1P07996 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC22.18■■□□□ 1.14
THBS1P07996 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
THBS1P07996 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
THBS1P07996 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
THBS1P07996 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
THBS1P07996 CEBPA-AS1-201ENST00000592982 2198 ntBASIC22.18■■□□□ 1.14
THBS1P07996 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
THBS1P07996 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
THBS1P07996 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
THBS1P07996 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
THBS1P07996 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22.17■■□□□ 1.14
THBS1P07996 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
THBS1P07996 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.16■■□□□ 1.14
THBS1P07996 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC22.16■■□□□ 1.14
THBS1P07996 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
THBS1P07996 BRD4-212ENST00000630599 726 ntTSL 2 BASIC22.16■■□□□ 1.14
THBS1P07996 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
THBS1P07996 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
THBS1P07996 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
THBS1P07996 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
THBS1P07996 SMPD5-203ENST00000639008 1464 ntBASIC22.15■■□□□ 1.14
THBS1P07996 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC22.15■■□□□ 1.14
THBS1P07996 ABHD17AP3-201ENST00000503096 1137 ntBASIC22.15■■□□□ 1.14
THBS1P07996 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
THBS1P07996 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
THBS1P07996 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms