Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC26.04■■□□□ 1.76
RB1P06400 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
RB1P06400 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
RB1P06400 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC26.04■■□□□ 1.76
RB1P06400 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
RB1P06400 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC26.03■■□□□ 1.76
RB1P06400 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
RB1P06400 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
RB1P06400 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
RB1P06400 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
RB1P06400 KRT18P24-201ENST00000344739 1156 ntBASIC26.02■■□□□ 1.76
RB1P06400 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC26.02■■□□□ 1.76
RB1P06400 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC26.02■■□□□ 1.76
RB1P06400 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
RB1P06400 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
RB1P06400 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC26.01■■□□□ 1.75
RB1P06400 UNC93B8-201ENST00000511903 705 ntBASIC26■■□□□ 1.75
RB1P06400 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
RB1P06400 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC25.99■■□□□ 1.75
RB1P06400 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
RB1P06400 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC25.99■■□□□ 1.75
RB1P06400 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC25.99■■□□□ 1.75
RB1P06400 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
RB1P06400 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
RB1P06400 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC25.98■■□□□ 1.75
RB1P06400 KRT16P3-201ENST00000439127 1283 ntBASIC25.98■■□□□ 1.75
RB1P06400 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC25.98■■□□□ 1.75
RB1P06400 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
RB1P06400 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC25.98■■□□□ 1.75
RB1P06400 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC25.97■■□□□ 1.75
RB1P06400 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
RB1P06400 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC25.97■■□□□ 1.75
RB1P06400 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC25.97■■□□□ 1.75
RB1P06400 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC25.96■■□□□ 1.75
RB1P06400 AC137630.3-201ENST00000607245 391 ntBASIC25.96■■□□□ 1.75
RB1P06400 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC25.96■■□□□ 1.75
RB1P06400 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC25.96■■□□□ 1.75
RB1P06400 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
RB1P06400 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
RB1P06400 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
RB1P06400 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
RB1P06400 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC25.95■■□□□ 1.74
RB1P06400 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC25.95■■□□□ 1.74
RB1P06400 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
RB1P06400 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC25.94■■□□□ 1.74
RB1P06400 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC25.94■■□□□ 1.74
RB1P06400 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC25.94■■□□□ 1.74
RB1P06400 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
RB1P06400 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC25.94■■□□□ 1.74
RB1P06400 PROC-203ENST00000409048 1586 ntTSL 5 BASIC25.94■■□□□ 1.74
RB1P06400 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
RB1P06400 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC25.93■■□□□ 1.74
RB1P06400 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC25.93■■□□□ 1.74
RB1P06400 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
RB1P06400 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC25.93■■□□□ 1.74
RB1P06400 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC25.93■■□□□ 1.74
RB1P06400 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
RB1P06400 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
RB1P06400 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
RB1P06400 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC25.92■■□□□ 1.74
RB1P06400 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
RB1P06400 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
RB1P06400 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC25.91■■□□□ 1.74
RB1P06400 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
RB1P06400 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC25.9■■□□□ 1.74
RB1P06400 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
RB1P06400 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.74
RB1P06400 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC25.89■■□□□ 1.74
RB1P06400 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.74
RB1P06400 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
RB1P06400 AC021242.3-201ENST00000607598 1377 ntBASIC25.89■■□□□ 1.74
RB1P06400 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC25.88■■□□□ 1.73
RB1P06400 MIR638-201ENST00000385237 100 ntBASIC25.88■■□□□ 1.73
RB1P06400 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC25.88■■□□□ 1.73
RB1P06400 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
RB1P06400 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC25.88■■□□□ 1.73
RB1P06400 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC25.88■■□□□ 1.73
RB1P06400 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC25.88■■□□□ 1.73
RB1P06400 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
RB1P06400 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
RB1P06400 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
RB1P06400 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
RB1P06400 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC25.86■■□□□ 1.73
RB1P06400 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC25.86■■□□□ 1.73
RB1P06400 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC25.85■■□□□ 1.73
RB1P06400 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC25.85■■□□□ 1.73
RB1P06400 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
RB1P06400 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC25.85■■□□□ 1.73
RB1P06400 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC25.85■■□□□ 1.73
RB1P06400 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
RB1P06400 TSPY9P-201ENST00000440215 945 ntBASIC25.84■■□□□ 1.73
RB1P06400 TSPY11P-201ENST00000442607 1045 ntBASIC25.84■■□□□ 1.73
RB1P06400 AL139246.5-201ENST00000606645 996 ntBASIC25.84■■□□□ 1.73
RB1P06400 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
RB1P06400 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
RB1P06400 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC25.83■■□□□ 1.73
RB1P06400 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC25.83■■□□□ 1.73
RB1P06400 AC120024.1-201ENST00000562672 995 ntBASIC25.83■■□□□ 1.73
RB1P06400 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC25.83■■□□□ 1.73
RB1P06400 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC25.83■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms