Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
CHGBP05060 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
CHGBP05060 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CHGBP05060 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC29.31■■■□□ 2.28
CHGBP05060 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC29.3■■■□□ 2.28
CHGBP05060 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC29.3■■■□□ 2.28
CHGBP05060 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC29.3■■■□□ 2.28
CHGBP05060 ERN1-208ENST00000606895 2068 ntBASIC29.3■■■□□ 2.28
CHGBP05060 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CHGBP05060 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC29.29■■■□□ 2.28
CHGBP05060 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CHGBP05060 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC29.29■■■□□ 2.28
CHGBP05060 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC29.28■■■□□ 2.28
CHGBP05060 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CHGBP05060 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CHGBP05060 AC004987.1-201ENST00000428627 508 ntBASIC29.28■■■□□ 2.28
CHGBP05060 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC29.28■■■□□ 2.28
CHGBP05060 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC29.28■■■□□ 2.28
CHGBP05060 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
CHGBP05060 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
CHGBP05060 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC29.27■■■□□ 2.28
CHGBP05060 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
CHGBP05060 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
CHGBP05060 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.28
CHGBP05060 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC29.26■■■□□ 2.28
CHGBP05060 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.27
CHGBP05060 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC29.26■■■□□ 2.27
CHGBP05060 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
CHGBP05060 DUX4L9-201ENST00000449051 1259 ntBASIC29.26■■■□□ 2.27
CHGBP05060 HES4-204ENST00000484667 667 ntTSL 3 BASIC29.26■■■□□ 2.27
CHGBP05060 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC29.26■■■□□ 2.27
CHGBP05060 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC29.26■■■□□ 2.27
CHGBP05060 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
CHGBP05060 AL033527.3-201ENST00000566366 1196 ntBASIC29.25■■■□□ 2.27
CHGBP05060 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC29.25■■■□□ 2.27
CHGBP05060 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC29.24■■■□□ 2.27
CHGBP05060 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
CHGBP05060 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC29.24■■■□□ 2.27
CHGBP05060 DUX4L18-201ENST00000553347 1267 ntBASIC29.24■■■□□ 2.27
CHGBP05060 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
CHGBP05060 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC29.23■■■□□ 2.27
CHGBP05060 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
CHGBP05060 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
CHGBP05060 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
CHGBP05060 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
CHGBP05060 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC29.22■■■□□ 2.27
CHGBP05060 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
CHGBP05060 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
CHGBP05060 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
CHGBP05060 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
CHGBP05060 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC29.22■■■□□ 2.27
CHGBP05060 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC29.22■■■□□ 2.27
CHGBP05060 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC29.22■■■□□ 2.27
CHGBP05060 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC29.21■■■□□ 2.27
CHGBP05060 ATP5G2P3-201ENST00000429083 425 ntBASIC29.21■■■□□ 2.27
CHGBP05060 AC012354.3-201ENST00000623734 483 ntBASIC29.21■■■□□ 2.27
CHGBP05060 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
CHGBP05060 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC29.2■■■□□ 2.27
CHGBP05060 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
CHGBP05060 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
CHGBP05060 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC29.2■■■□□ 2.27
CHGBP05060 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC29.2■■■□□ 2.27
CHGBP05060 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
CHGBP05060 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC29.19■■■□□ 2.26
CHGBP05060 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC29.19■■■□□ 2.26
CHGBP05060 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC29.19■■■□□ 2.26
CHGBP05060 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC29.19■■■□□ 2.26
CHGBP05060 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC29.19■■■□□ 2.26
CHGBP05060 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC29.19■■■□□ 2.26
CHGBP05060 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC29.18■■■□□ 2.26
CHGBP05060 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
CHGBP05060 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
CHGBP05060 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC29.18■■■□□ 2.26
CHGBP05060 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC29.18■■■□□ 2.26
CHGBP05060 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC29.18■■■□□ 2.26
CHGBP05060 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
CHGBP05060 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC29.17■■■□□ 2.26
CHGBP05060 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC29.16■■■□□ 2.26
CHGBP05060 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
CHGBP05060 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
CHGBP05060 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
CHGBP05060 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
CHGBP05060 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
CHGBP05060 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC29.16■■■□□ 2.26
CHGBP05060 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC29.16■■■□□ 2.26
CHGBP05060 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC29.16■■■□□ 2.26
CHGBP05060 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
CHGBP05060 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
CHGBP05060 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
CHGBP05060 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC29.15■■■□□ 2.26
CHGBP05060 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
CHGBP05060 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC29.15■■■□□ 2.26
CHGBP05060 AC091060.1-201ENST00000623524 1766 ntBASIC29.15■■■□□ 2.26
CHGBP05060 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC29.15■■■□□ 2.26
CHGBP05060 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
CHGBP05060 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC29.14■■■□□ 2.26
CHGBP05060 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
CHGBP05060 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
CHGBP05060 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC29.14■■■□□ 2.26
CHGBP05060 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC29.14■■■□□ 2.26
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms