Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LCATP04180 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LCATP04180 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.07■□□□□ 0.96
LCATP04180 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.07■□□□□ 0.96
LCATP04180 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
LCATP04180 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.07■□□□□ 0.96
LCATP04180 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
LCATP04180 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LCATP04180 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LCATP04180 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LCATP04180 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LCATP04180 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LCATP04180 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.05■□□□□ 0.96
LCATP04180 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.05■□□□□ 0.96
LCATP04180 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.05■□□□□ 0.96
LCATP04180 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.05■□□□□ 0.96
LCATP04180 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
LCATP04180 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
LCATP04180 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LCATP04180 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LCATP04180 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LCATP04180 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
LCATP04180 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.04■□□□□ 0.96
LCATP04180 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
LCATP04180 AC092296.2-201ENST00000589470 999 ntBASIC21.04■□□□□ 0.96
LCATP04180 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LCATP04180 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.04■□□□□ 0.96
LCATP04180 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LCATP04180 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LCATP04180 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LCATP04180 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LCATP04180 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LCATP04180 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LCATP04180 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LCATP04180 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.04■□□□□ 0.96
LCATP04180 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LCATP04180 AC010501.1-201ENST00000606270 1962 ntBASIC21.03■□□□□ 0.96
LCATP04180 SMPD5-203ENST00000639008 1464 ntBASIC21.03■□□□□ 0.96
LCATP04180 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.03■□□□□ 0.96
LCATP04180 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.03■□□□□ 0.96
LCATP04180 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
LCATP04180 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LCATP04180 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LCATP04180 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LCATP04180 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
LCATP04180 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LCATP04180 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LCATP04180 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.01■□□□□ 0.95
LCATP04180 AC025884.2-201ENST00000553429 711 ntBASIC21.01■□□□□ 0.95
LCATP04180 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LCATP04180 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.01■□□□□ 0.95
LCATP04180 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LCATP04180 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.01■□□□□ 0.95
LCATP04180 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
LCATP04180 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.01■□□□□ 0.95
LCATP04180 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LCATP04180 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
LCATP04180 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
LCATP04180 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21■□□□□ 0.95
LCATP04180 ECEL1P2-201ENST00000461596 1295 ntBASIC21■□□□□ 0.95
LCATP04180 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21■□□□□ 0.95
LCATP04180 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LCATP04180 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LCATP04180 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
LCATP04180 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
LCATP04180 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.99■□□□□ 0.95
LCATP04180 GPX1-201ENST00000419349 1106 ntBASIC20.99■□□□□ 0.95
LCATP04180 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
LCATP04180 MIR3960-201ENST00000583311 91 ntBASIC20.99■□□□□ 0.95
LCATP04180 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LCATP04180 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LCATP04180 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LCATP04180 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LCATP04180 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LCATP04180 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LCATP04180 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
LCATP04180 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LCATP04180 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.97■□□□□ 0.95
LCATP04180 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
LCATP04180 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LCATP04180 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.97■□□□□ 0.95
LCATP04180 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LCATP04180 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
LCATP04180 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LCATP04180 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LCATP04180 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LCATP04180 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LCATP04180 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.96■□□□□ 0.95
LCATP04180 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
LCATP04180 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LCATP04180 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
LCATP04180 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
LCATP04180 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LCATP04180 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.95■□□□□ 0.94
LCATP04180 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.95■□□□□ 0.94
LCATP04180 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LCATP04180 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LCATP04180 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LCATP04180 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
LCATP04180 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms