Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
MT-ND3P03897 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
MT-ND3P03897 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
MT-ND3P03897 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
MT-ND3P03897 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC24.46■■□□□ 1.51
MT-ND3P03897 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
MT-ND3P03897 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC24.46■■□□□ 1.51
MT-ND3P03897 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
MT-ND3P03897 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.51
MT-ND3P03897 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
MT-ND3P03897 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
MT-ND3P03897 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC24.45■■□□□ 1.5
MT-ND3P03897 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC24.45■■□□□ 1.5
MT-ND3P03897 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC24.45■■□□□ 1.5
MT-ND3P03897 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
MT-ND3P03897 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
MT-ND3P03897 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
MT-ND3P03897 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
MT-ND3P03897 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
MT-ND3P03897 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
MT-ND3P03897 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC24.44■■□□□ 1.5
MT-ND3P03897 SRP68-213ENST00000629930 165 ntTSL 5 BASIC24.44■■□□□ 1.5
MT-ND3P03897 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
MT-ND3P03897 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC24.43■■□□□ 1.5
MT-ND3P03897 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
MT-ND3P03897 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
MT-ND3P03897 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC24.43■■□□□ 1.5
MT-ND3P03897 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
MT-ND3P03897 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC24.42■■□□□ 1.5
MT-ND3P03897 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC24.42■■□□□ 1.5
MT-ND3P03897 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC24.42■■□□□ 1.5
MT-ND3P03897 TPT1-202ENST00000379055 948 ntTSL 2 BASIC24.42■■□□□ 1.5
MT-ND3P03897 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC24.42■■□□□ 1.5
MT-ND3P03897 AC008813.1-201ENST00000536597 885 ntBASIC24.42■■□□□ 1.5
MT-ND3P03897 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
MT-ND3P03897 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
MT-ND3P03897 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
MT-ND3P03897 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
MT-ND3P03897 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
MT-ND3P03897 RPS2-210ENST00000530225 765 ntTSL 2 BASIC24.4■■□□□ 1.5
MT-ND3P03897 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC24.4■■□□□ 1.5
MT-ND3P03897 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.5
MT-ND3P03897 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
MT-ND3P03897 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC24.39■■□□□ 1.5
MT-ND3P03897 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC24.39■■□□□ 1.49
MT-ND3P03897 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
MT-ND3P03897 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.49
MT-ND3P03897 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
MT-ND3P03897 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
MT-ND3P03897 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
MT-ND3P03897 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC24.38■■□□□ 1.49
MT-ND3P03897 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC24.38■■□□□ 1.49
MT-ND3P03897 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC24.38■■□□□ 1.49
MT-ND3P03897 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
MT-ND3P03897 AC142381.3-201ENST00000568208 1670 ntBASIC24.38■■□□□ 1.49
MT-ND3P03897 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
MT-ND3P03897 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC24.37■■□□□ 1.49
MT-ND3P03897 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC24.37■■□□□ 1.49
MT-ND3P03897 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
MT-ND3P03897 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
MT-ND3P03897 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
MT-ND3P03897 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
MT-ND3P03897 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
MT-ND3P03897 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
MT-ND3P03897 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
MT-ND3P03897 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
MT-ND3P03897 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC24.34■■□□□ 1.49
MT-ND3P03897 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
MT-ND3P03897 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
MT-ND3P03897 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC24.34■■□□□ 1.49
MT-ND3P03897 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
MT-ND3P03897 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
MT-ND3P03897 MED17-227ENST00000640521 2047 ntTSL 5 BASIC24.34■■□□□ 1.49
MT-ND3P03897 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
MT-ND3P03897 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
MT-ND3P03897 GPX1-201ENST00000419349 1106 ntBASIC24.33■■□□□ 1.49
MT-ND3P03897 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC24.33■■□□□ 1.49
MT-ND3P03897 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
MT-ND3P03897 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC24.33■■□□□ 1.49
MT-ND3P03897 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
MT-ND3P03897 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
MT-ND3P03897 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
MT-ND3P03897 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC24.32■■□□□ 1.48
MT-ND3P03897 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
MT-ND3P03897 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
MT-ND3P03897 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
MT-ND3P03897 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
MT-ND3P03897 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
MT-ND3P03897 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
MT-ND3P03897 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
MT-ND3P03897 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
MT-ND3P03897 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
MT-ND3P03897 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC24.3■■□□□ 1.48
MT-ND3P03897 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
MT-ND3P03897 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
MT-ND3P03897 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
MT-ND3P03897 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
MT-ND3P03897 AC022211.4-201ENST00000625094 2161 ntBASIC24.29■■□□□ 1.48
MT-ND3P03897 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
MT-ND3P03897 RARRES2P2-201ENST00000394842 485 ntBASIC24.29■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms