Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CSPG5O95196 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC26.08■■□□□ 1.77
CSPG5O95196 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CSPG5O95196 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
CSPG5O95196 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC26.08■■□□□ 1.77
CSPG5O95196 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC26.08■■□□□ 1.77
CSPG5O95196 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
CSPG5O95196 AC087393.1-201ENST00000582896 145 ntBASIC26.07■■□□□ 1.76
CSPG5O95196 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CSPG5O95196 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC26.07■■□□□ 1.76
CSPG5O95196 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.76
CSPG5O95196 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CSPG5O95196 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC26.06■■□□□ 1.76
CSPG5O95196 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CSPG5O95196 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CSPG5O95196 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CSPG5O95196 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
CSPG5O95196 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
CSPG5O95196 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CSPG5O95196 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC26.05■■□□□ 1.76
CSPG5O95196 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
CSPG5O95196 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CSPG5O95196 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CSPG5O95196 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
CSPG5O95196 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CSPG5O95196 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CSPG5O95196 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CSPG5O95196 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
CSPG5O95196 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC26.04■■□□□ 1.76
CSPG5O95196 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
CSPG5O95196 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CSPG5O95196 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC26.04■■□□□ 1.76
CSPG5O95196 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CSPG5O95196 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC26.03■■□□□ 1.76
CSPG5O95196 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CSPG5O95196 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
CSPG5O95196 RPS2P7-201ENST00000447334 885 ntBASIC26.03■■□□□ 1.76
CSPG5O95196 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CSPG5O95196 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CSPG5O95196 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CSPG5O95196 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CSPG5O95196 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CSPG5O95196 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC26.02■■□□□ 1.76
CSPG5O95196 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC26.02■■□□□ 1.76
CSPG5O95196 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC26.01■■□□□ 1.75
CSPG5O95196 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC26■■□□□ 1.75
CSPG5O95196 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CSPG5O95196 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
CSPG5O95196 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC26■■□□□ 1.75
CSPG5O95196 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CSPG5O95196 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CSPG5O95196 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC25.99■■□□□ 1.75
CSPG5O95196 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC25.99■■□□□ 1.75
CSPG5O95196 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC25.99■■□□□ 1.75
CSPG5O95196 KRT125P-201ENST00000546827 989 ntBASIC25.99■■□□□ 1.75
CSPG5O95196 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CSPG5O95196 LONRF2P2-201ENST00000439212 571 ntBASIC25.98■■□□□ 1.75
CSPG5O95196 MIR4787-201ENST00000607364 84 ntBASIC25.98■■□□□ 1.75
CSPG5O95196 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC25.97■■□□□ 1.75
CSPG5O95196 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
CSPG5O95196 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
CSPG5O95196 TSPY9P-201ENST00000440215 945 ntBASIC25.97■■□□□ 1.75
CSPG5O95196 TSPY11P-201ENST00000442607 1045 ntBASIC25.97■■□□□ 1.75
CSPG5O95196 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC25.97■■□□□ 1.75
CSPG5O95196 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC25.97■■□□□ 1.75
CSPG5O95196 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
CSPG5O95196 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
CSPG5O95196 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC25.96■■□□□ 1.75
CSPG5O95196 LSM7-203ENST00000585409 512 ntTSL 2 BASIC25.96■■□□□ 1.75
CSPG5O95196 AC019171.1-201ENST00000601251 1056 ntBASIC25.96■■□□□ 1.75
CSPG5O95196 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC25.96■■□□□ 1.75
CSPG5O95196 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
CSPG5O95196 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CSPG5O95196 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC25.96■■□□□ 1.75
CSPG5O95196 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
CSPG5O95196 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
CSPG5O95196 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CSPG5O95196 Z92544.1-202ENST00000571933 1220 ntBASIC25.95■■□□□ 1.74
CSPG5O95196 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC25.95■■□□□ 1.74
CSPG5O95196 AC139426.1-201ENST00000568218 2529 ntBASIC25.95■■□□□ 1.74
CSPG5O95196 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
CSPG5O95196 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC25.94■■□□□ 1.74
CSPG5O95196 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC25.94■■□□□ 1.74
CSPG5O95196 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CSPG5O95196 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
CSPG5O95196 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC25.93■■□□□ 1.74
CSPG5O95196 BX664725.1-201ENST00000438252 379 ntBASIC25.93■■□□□ 1.74
CSPG5O95196 KRT16P3-201ENST00000439127 1283 ntBASIC25.93■■□□□ 1.74
CSPG5O95196 UNC93B8-201ENST00000511903 705 ntBASIC25.93■■□□□ 1.74
CSPG5O95196 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
CSPG5O95196 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
CSPG5O95196 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC25.92■■□□□ 1.74
CSPG5O95196 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC25.92■■□□□ 1.74
CSPG5O95196 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
CSPG5O95196 PEMT-206ENST00000435340 960 ntTSL 5 BASIC25.92■■□□□ 1.74
CSPG5O95196 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
CSPG5O95196 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
CSPG5O95196 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC25.91■■□□□ 1.74
CSPG5O95196 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC25.91■■□□□ 1.74
CSPG5O95196 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms