Protein–RNA interactions for Protein: O75818

RPP40, Ribonuclease P protein subunit p40, humanhuman

Known RBP Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40O75818 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
RPP40O75818 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
RPP40O75818 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC24.95■■□□□ 1.58
RPP40O75818 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC24.95■■□□□ 1.58
RPP40O75818 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
RPP40O75818 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC24.94■■□□□ 1.58
RPP40O75818 AC103834.1-201ENST00000520383 144 ntBASIC24.94■■□□□ 1.58
RPP40O75818 MIR3960-201ENST00000583311 91 ntBASIC24.94■■□□□ 1.58
RPP40O75818 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC24.94■■□□□ 1.58
RPP40O75818 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC24.94■■□□□ 1.58
RPP40O75818 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC24.94■■□□□ 1.58
RPP40O75818 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC24.93■■□□□ 1.58
RPP40O75818 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
RPP40O75818 PFN2-211ENST00000489155 636 ntTSL 4 BASIC24.93■■□□□ 1.58
RPP40O75818 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
RPP40O75818 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
RPP40O75818 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
RPP40O75818 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC24.92■■□□□ 1.58
RPP40O75818 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
RPP40O75818 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC24.92■■□□□ 1.58
RPP40O75818 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
RPP40O75818 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC24.92■■□□□ 1.58
RPP40O75818 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC24.92■■□□□ 1.58
RPP40O75818 AC018755.3-202ENST00000596210 929 ntBASIC24.92■■□□□ 1.58
RPP40O75818 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC24.92■■□□□ 1.58
RPP40O75818 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
RPP40O75818 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
RPP40O75818 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
RPP40O75818 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
RPP40O75818 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC24.91■■□□□ 1.58
RPP40O75818 THA1P-201ENST00000590384 1145 ntBASIC24.91■■□□□ 1.58
RPP40O75818 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
RPP40O75818 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
RPP40O75818 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC24.9■■□□□ 1.58
RPP40O75818 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
RPP40O75818 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
RPP40O75818 GUSBP5-201ENST00000418136 578 ntBASIC24.9■■□□□ 1.58
RPP40O75818 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
RPP40O75818 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC24.89■■□□□ 1.58
RPP40O75818 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC24.89■■□□□ 1.58
RPP40O75818 PVT1_1.1-201ENST00000615125 194 ntBASIC24.89■■□□□ 1.58
RPP40O75818 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RPP40O75818 AL449106.1-201ENST00000608517 1980 ntBASIC24.88■■□□□ 1.57
RPP40O75818 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RPP40O75818 OR2A1-AS1-204ENST00000470435 602 ntBASIC24.88■■□□□ 1.57
RPP40O75818 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RPP40O75818 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC24.87■■□□□ 1.57
RPP40O75818 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RPP40O75818 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC24.87■■□□□ 1.57
RPP40O75818 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
RPP40O75818 WHAMMP3-201ENST00000611636 1609 ntBASIC24.86■■□□□ 1.57
RPP40O75818 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC24.86■■□□□ 1.57
RPP40O75818 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
RPP40O75818 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
RPP40O75818 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC24.86■■□□□ 1.57
RPP40O75818 MIR4508-201ENST00000584178 70 ntBASIC24.86■■□□□ 1.57
RPP40O75818 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
RPP40O75818 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
RPP40O75818 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.57
RPP40O75818 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
RPP40O75818 PKM-203ENST00000389093 2279 ntTSL 5 BASIC24.84■■□□□ 1.57
RPP40O75818 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC24.84■■□□□ 1.57
RPP40O75818 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC24.84■■□□□ 1.57
RPP40O75818 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
RPP40O75818 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC24.83■■□□□ 1.57
RPP40O75818 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
RPP40O75818 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC24.83■■□□□ 1.57
RPP40O75818 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC24.83■■□□□ 1.57
RPP40O75818 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
RPP40O75818 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
RPP40O75818 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
RPP40O75818 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC24.82■■□□□ 1.56
RPP40O75818 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC24.82■■□□□ 1.56
RPP40O75818 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
RPP40O75818 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
RPP40O75818 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
RPP40O75818 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
RPP40O75818 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC24.82■■□□□ 1.56
RPP40O75818 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
RPP40O75818 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC24.81■■□□□ 1.56
RPP40O75818 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC24.81■■□□□ 1.56
RPP40O75818 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
RPP40O75818 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
RPP40O75818 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
RPP40O75818 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC24.8■■□□□ 1.56
RPP40O75818 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.8■■□□□ 1.56
RPP40O75818 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
RPP40O75818 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
RPP40O75818 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
RPP40O75818 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
RPP40O75818 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
RPP40O75818 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
RPP40O75818 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
RPP40O75818 IDNK-203ENST00000405990 629 ntTSL 2 BASIC24.79■■□□□ 1.56
RPP40O75818 AL031848.2-201ENST00000607670 837 ntBASIC24.79■■□□□ 1.56
RPP40O75818 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC24.79■■□□□ 1.56
RPP40O75818 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC24.79■■□□□ 1.56
RPP40O75818 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
RPP40O75818 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
RPP40O75818 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC24.78■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms