Protein–RNA interactions for Protein: O14788

TNFSF11, Tumor necrosis factor ligand superfamily member 11, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11O14788 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.78■■□□□ 1.08
TNFSF11O14788 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TNFSF11O14788 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.77■■□□□ 1.08
TNFSF11O14788 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TNFSF11O14788 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TNFSF11O14788 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TNFSF11O14788 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.77■■□□□ 1.08
TNFSF11O14788 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TNFSF11O14788 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TNFSF11O14788 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TNFSF11O14788 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
TNFSF11O14788 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.77■■□□□ 1.08
TNFSF11O14788 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TNFSF11O14788 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TNFSF11O14788 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
TNFSF11O14788 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TNFSF11O14788 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TNFSF11O14788 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
TNFSF11O14788 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TNFSF11O14788 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
TNFSF11O14788 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.75■■□□□ 1.07
TNFSF11O14788 AC129492.7-201ENST00000622992 756 ntBASIC21.75■■□□□ 1.07
TNFSF11O14788 AC012354.3-201ENST00000623734 483 ntBASIC21.75■■□□□ 1.07
TNFSF11O14788 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TNFSF11O14788 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TNFSF11O14788 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TNFSF11O14788 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TNFSF11O14788 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TNFSF11O14788 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TNFSF11O14788 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TNFSF11O14788 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TNFSF11O14788 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21.74■■□□□ 1.07
TNFSF11O14788 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
TNFSF11O14788 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
TNFSF11O14788 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21.74■■□□□ 1.07
TNFSF11O14788 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TNFSF11O14788 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TNFSF11O14788 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.73■■□□□ 1.07
TNFSF11O14788 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TNFSF11O14788 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.73■■□□□ 1.07
TNFSF11O14788 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
TNFSF11O14788 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
TNFSF11O14788 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TNFSF11O14788 SPCS2P3-201ENST00000500401 656 ntBASIC21.72■■□□□ 1.07
TNFSF11O14788 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC21.72■■□□□ 1.07
TNFSF11O14788 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
TNFSF11O14788 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
TNFSF11O14788 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.72■■□□□ 1.07
TNFSF11O14788 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TNFSF11O14788 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
TNFSF11O14788 DUX4L9-201ENST00000449051 1259 ntBASIC21.71■■□□□ 1.07
TNFSF11O14788 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
TNFSF11O14788 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.07
TNFSF11O14788 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
TNFSF11O14788 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
TNFSF11O14788 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TNFSF11O14788 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
TNFSF11O14788 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TNFSF11O14788 AC004987.1-201ENST00000428627 508 ntBASIC21.7■■□□□ 1.06
TNFSF11O14788 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.7■■□□□ 1.06
TNFSF11O14788 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TNFSF11O14788 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
TNFSF11O14788 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TNFSF11O14788 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TNFSF11O14788 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
TNFSF11O14788 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TNFSF11O14788 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.69■■□□□ 1.06
TNFSF11O14788 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TNFSF11O14788 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.69■■□□□ 1.06
TNFSF11O14788 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.68■■□□□ 1.06
TNFSF11O14788 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TNFSF11O14788 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TNFSF11O14788 ATP5G2P3-201ENST00000429083 425 ntBASIC21.68■■□□□ 1.06
TNFSF11O14788 DUX4L18-201ENST00000553347 1267 ntBASIC21.68■■□□□ 1.06
TNFSF11O14788 AL033527.3-201ENST00000566366 1196 ntBASIC21.68■■□□□ 1.06
TNFSF11O14788 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
TNFSF11O14788 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TNFSF11O14788 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TNFSF11O14788 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.67■■□□□ 1.06
TNFSF11O14788 TSPY13P-201ENST00000338964 914 ntBASIC21.67■■□□□ 1.06
TNFSF11O14788 AC018755.3-202ENST00000596210 929 ntBASIC21.67■■□□□ 1.06
TNFSF11O14788 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TNFSF11O14788 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.66■■□□□ 1.06
TNFSF11O14788 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TNFSF11O14788 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.66■■□□□ 1.06
TNFSF11O14788 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TNFSF11O14788 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.66■■□□□ 1.06
TNFSF11O14788 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
TNFSF11O14788 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
TNFSF11O14788 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TNFSF11O14788 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
TNFSF11O14788 MIR6765-201ENST00000614092 87 ntBASIC21.65■■□□□ 1.06
TNFSF11O14788 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.65■■□□□ 1.06
TNFSF11O14788 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.64■■□□□ 1.05
TNFSF11O14788 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TNFSF11O14788 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TNFSF11O14788 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.64■■□□□ 1.05
TNFSF11O14788 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.64■■□□□ 1.05
TNFSF11O14788 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TNFSF11O14788 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms