Protein–RNA interactions for Protein: O00458

IFRD1, Interferon-related developmental regulator 1, humanhuman

Predicted RBP Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1O00458 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC23.85■■□□□ 1.41
IFRD1O00458 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
IFRD1O00458 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
IFRD1O00458 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.84■■□□□ 1.41
IFRD1O00458 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
IFRD1O00458 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
IFRD1O00458 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
IFRD1O00458 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
IFRD1O00458 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
IFRD1O00458 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC23.83■■□□□ 1.41
IFRD1O00458 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.83■■□□□ 1.41
IFRD1O00458 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
IFRD1O00458 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
IFRD1O00458 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
IFRD1O00458 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
IFRD1O00458 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
IFRD1O00458 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
IFRD1O00458 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
IFRD1O00458 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
IFRD1O00458 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
IFRD1O00458 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
IFRD1O00458 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
IFRD1O00458 HES4-204ENST00000484667 667 ntTSL 3 BASIC23.81■■□□□ 1.4
IFRD1O00458 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC23.81■■□□□ 1.4
IFRD1O00458 AC133552.2-201ENST00000619106 1032 ntBASIC23.81■■□□□ 1.4
IFRD1O00458 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
IFRD1O00458 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
IFRD1O00458 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
IFRD1O00458 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC23.8■■□□□ 1.4
IFRD1O00458 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
IFRD1O00458 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.8■■□□□ 1.4
IFRD1O00458 NTF6A-201ENST00000591175 560 ntBASIC23.8■■□□□ 1.4
IFRD1O00458 AC026202.3-201ENST00000600805 1127 ntBASIC23.8■■□□□ 1.4
IFRD1O00458 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
IFRD1O00458 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
IFRD1O00458 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.79■■□□□ 1.4
IFRD1O00458 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.79■■□□□ 1.4
IFRD1O00458 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
IFRD1O00458 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.79■■□□□ 1.4
IFRD1O00458 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC23.78■■□□□ 1.4
IFRD1O00458 AC009831.1-201ENST00000580420 1582 ntBASIC23.78■■□□□ 1.4
IFRD1O00458 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
IFRD1O00458 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC23.78■■□□□ 1.4
IFRD1O00458 U85056.1-201ENST00000616429 682 ntBASIC23.78■■□□□ 1.4
IFRD1O00458 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
IFRD1O00458 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
IFRD1O00458 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
IFRD1O00458 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC23.77■■□□□ 1.4
IFRD1O00458 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
IFRD1O00458 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
IFRD1O00458 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
IFRD1O00458 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
IFRD1O00458 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
IFRD1O00458 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.76■■□□□ 1.39
IFRD1O00458 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC23.76■■□□□ 1.39
IFRD1O00458 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
IFRD1O00458 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
IFRD1O00458 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
IFRD1O00458 RAP2CP1-202ENST00000605179 643 ntBASIC23.75■■□□□ 1.39
IFRD1O00458 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
IFRD1O00458 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
IFRD1O00458 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.75■■□□□ 1.39
IFRD1O00458 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.74■■□□□ 1.39
IFRD1O00458 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
IFRD1O00458 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
IFRD1O00458 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
IFRD1O00458 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC23.74■■□□□ 1.39
IFRD1O00458 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
IFRD1O00458 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC23.74■■□□□ 1.39
IFRD1O00458 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
IFRD1O00458 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
IFRD1O00458 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
IFRD1O00458 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.73■■□□□ 1.39
IFRD1O00458 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
IFRD1O00458 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
IFRD1O00458 AC135731.1-201ENST00000569415 2548 ntBASIC23.72■■□□□ 1.39
IFRD1O00458 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
IFRD1O00458 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
IFRD1O00458 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
IFRD1O00458 DUSP8P4-201ENST00000399538 1761 ntBASIC23.72■■□□□ 1.39
IFRD1O00458 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
IFRD1O00458 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
IFRD1O00458 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
IFRD1O00458 AL592293.1-201ENST00000502889 1188 ntBASIC23.71■■□□□ 1.39
IFRD1O00458 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
IFRD1O00458 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
IFRD1O00458 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC23.7■■□□□ 1.38
IFRD1O00458 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
IFRD1O00458 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC23.7■■□□□ 1.38
IFRD1O00458 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC23.7■■□□□ 1.38
IFRD1O00458 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC23.7■■□□□ 1.38
IFRD1O00458 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
IFRD1O00458 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
IFRD1O00458 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
IFRD1O00458 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
IFRD1O00458 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
IFRD1O00458 AC092803.2-201ENST00000564287 1899 ntBASIC23.68■■□□□ 1.38
IFRD1O00458 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
IFRD1O00458 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC23.68■■□□□ 1.38
IFRD1O00458 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms