Protein–RNA interactions for Protein: A0A1W2PRY6

SMIM27, Small integral membrane protein 27 (Fragment), humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM27A0A1W2PRY6 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMIM27A0A1W2PRY6 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC18.09■□□□□ 0.49
SMIM27A0A1W2PRY6 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SMIM27A0A1W2PRY6 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMIM27A0A1W2PRY6 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMIM27A0A1W2PRY6 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC18.09■□□□□ 0.49
SMIM27A0A1W2PRY6 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMIM27A0A1W2PRY6 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMIM27A0A1W2PRY6 AC096887.2-201ENST00000623443 1957 ntBASIC18.09■□□□□ 0.49
SMIM27A0A1W2PRY6 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMIM27A0A1W2PRY6 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMIM27A0A1W2PRY6 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SMIM27A0A1W2PRY6 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SMIM27A0A1W2PRY6 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SMIM27A0A1W2PRY6 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SMIM27A0A1W2PRY6 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SMIM27A0A1W2PRY6 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SMIM27A0A1W2PRY6 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC18.08■□□□□ 0.48
SMIM27A0A1W2PRY6 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SMIM27A0A1W2PRY6 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SMIM27A0A1W2PRY6 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SMIM27A0A1W2PRY6 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SMIM27A0A1W2PRY6 AP003733.4-201ENST00000623785 1697 ntBASIC18.07■□□□□ 0.48
SMIM27A0A1W2PRY6 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SMIM27A0A1W2PRY6 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SMIM27A0A1W2PRY6 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SMIM27A0A1W2PRY6 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SMIM27A0A1W2PRY6 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SMIM27A0A1W2PRY6 DUSP8P5-201ENST00000422884 1815 ntBASIC18.07■□□□□ 0.48
SMIM27A0A1W2PRY6 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SMIM27A0A1W2PRY6 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SMIM27A0A1W2PRY6 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SMIM27A0A1W2PRY6 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SMIM27A0A1W2PRY6 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SMIM27A0A1W2PRY6 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SMIM27A0A1W2PRY6 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
SMIM27A0A1W2PRY6 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SMIM27A0A1W2PRY6 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SMIM27A0A1W2PRY6 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SMIM27A0A1W2PRY6 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SMIM27A0A1W2PRY6 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SMIM27A0A1W2PRY6 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SMIM27A0A1W2PRY6 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC18.05■□□□□ 0.48
SMIM27A0A1W2PRY6 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SMIM27A0A1W2PRY6 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC18.04■□□□□ 0.48
SMIM27A0A1W2PRY6 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.04■□□□□ 0.48
SMIM27A0A1W2PRY6 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SMIM27A0A1W2PRY6 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SMIM27A0A1W2PRY6 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
SMIM27A0A1W2PRY6 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SMIM27A0A1W2PRY6 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SMIM27A0A1W2PRY6 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SMIM27A0A1W2PRY6 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SMIM27A0A1W2PRY6 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
SMIM27A0A1W2PRY6 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SMIM27A0A1W2PRY6 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC18.03■□□□□ 0.48
SMIM27A0A1W2PRY6 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SMIM27A0A1W2PRY6 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SMIM27A0A1W2PRY6 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SMIM27A0A1W2PRY6 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SMIM27A0A1W2PRY6 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SMIM27A0A1W2PRY6 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SMIM27A0A1W2PRY6 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
SMIM27A0A1W2PRY6 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SMIM27A0A1W2PRY6 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SMIM27A0A1W2PRY6 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC18.02■□□□□ 0.48
SMIM27A0A1W2PRY6 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC18.02■□□□□ 0.48
SMIM27A0A1W2PRY6 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
SMIM27A0A1W2PRY6 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SMIM27A0A1W2PRY6 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SMIM27A0A1W2PRY6 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
SMIM27A0A1W2PRY6 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SMIM27A0A1W2PRY6 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SMIM27A0A1W2PRY6 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC18.01■□□□□ 0.47
SMIM27A0A1W2PRY6 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SMIM27A0A1W2PRY6 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SMIM27A0A1W2PRY6 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
SMIM27A0A1W2PRY6 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SMIM27A0A1W2PRY6 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SMIM27A0A1W2PRY6 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SMIM27A0A1W2PRY6 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SMIM27A0A1W2PRY6 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SMIM27A0A1W2PRY6 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SMIM27A0A1W2PRY6 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
SMIM27A0A1W2PRY6 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC17.99■□□□□ 0.47
SMIM27A0A1W2PRY6 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC17.99■□□□□ 0.47
SMIM27A0A1W2PRY6 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC17.99■□□□□ 0.47
SMIM27A0A1W2PRY6 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SMIM27A0A1W2PRY6 LINC00273-201ENST00000539813 1452 ntBASIC17.98■□□□□ 0.47
SMIM27A0A1W2PRY6 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMIM27A0A1W2PRY6 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMIM27A0A1W2PRY6 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMIM27A0A1W2PRY6 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMIM27A0A1W2PRY6 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SMIM27A0A1W2PRY6 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SMIM27A0A1W2PRY6 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMIM27A0A1W2PRY6 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMIM27A0A1W2PRY6 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMIM27A0A1W2PRY6 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC17.97■□□□□ 0.47
SMIM27A0A1W2PRY6 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms