Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
TRAV12-3A0A0B4J271 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
TRAV12-3A0A0B4J271 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV12-3A0A0B4J271 MED25-210ENST00000612854 801 ntTSL 5 BASIC17.89■□□□□ 0.45
TRAV12-3A0A0B4J271 MIR7108-201ENST00000614319 87 ntBASIC17.89■□□□□ 0.45
TRAV12-3A0A0B4J271 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV12-3A0A0B4J271 MED25-214ENST00000622402 642 ntTSL 5 BASIC17.89■□□□□ 0.45
TRAV12-3A0A0B4J271 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV12-3A0A0B4J271 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV12-3A0A0B4J271 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC17.88■□□□□ 0.45
TRAV12-3A0A0B4J271 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV12-3A0A0B4J271 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV12-3A0A0B4J271 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC17.88■□□□□ 0.45
TRAV12-3A0A0B4J271 AC010501.1-201ENST00000606270 1962 ntBASIC17.88■□□□□ 0.45
TRAV12-3A0A0B4J271 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV12-3A0A0B4J271 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV12-3A0A0B4J271 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV12-3A0A0B4J271 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
TRAV12-3A0A0B4J271 AC135731.1-201ENST00000569415 2548 ntBASIC17.87■□□□□ 0.45
TRAV12-3A0A0B4J271 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV12-3A0A0B4J271 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV12-3A0A0B4J271 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV12-3A0A0B4J271 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV12-3A0A0B4J271 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV12-3A0A0B4J271 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV12-3A0A0B4J271 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
TRAV12-3A0A0B4J271 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV12-3A0A0B4J271 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV12-3A0A0B4J271 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC17.86■□□□□ 0.45
TRAV12-3A0A0B4J271 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
TRAV12-3A0A0B4J271 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV12-3A0A0B4J271 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC17.85■□□□□ 0.45
TRAV12-3A0A0B4J271 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
TRAV12-3A0A0B4J271 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC17.85■□□□□ 0.45
TRAV12-3A0A0B4J271 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV12-3A0A0B4J271 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV12-3A0A0B4J271 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
TRAV12-3A0A0B4J271 PVT1-219ENST00000523427 938 ntTSL 3 BASIC17.84■□□□□ 0.45
TRAV12-3A0A0B4J271 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC17.84■□□□□ 0.45
TRAV12-3A0A0B4J271 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV12-3A0A0B4J271 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV12-3A0A0B4J271 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRAV12-3A0A0B4J271 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRAV12-3A0A0B4J271 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRAV12-3A0A0B4J271 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV12-3A0A0B4J271 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV12-3A0A0B4J271 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV12-3A0A0B4J271 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC17.83■□□□□ 0.44
TRAV12-3A0A0B4J271 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV12-3A0A0B4J271 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV12-3A0A0B4J271 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV12-3A0A0B4J271 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV12-3A0A0B4J271 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC17.82■□□□□ 0.44
TRAV12-3A0A0B4J271 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV12-3A0A0B4J271 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC17.82■□□□□ 0.44
TRAV12-3A0A0B4J271 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV12-3A0A0B4J271 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV12-3A0A0B4J271 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV12-3A0A0B4J271 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV12-3A0A0B4J271 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV12-3A0A0B4J271 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC17.81■□□□□ 0.44
TRAV12-3A0A0B4J271 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
TRAV12-3A0A0B4J271 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV12-3A0A0B4J271 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV12-3A0A0B4J271 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC17.81■□□□□ 0.44
TRAV12-3A0A0B4J271 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC17.81■□□□□ 0.44
TRAV12-3A0A0B4J271 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC17.81■□□□□ 0.44
TRAV12-3A0A0B4J271 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV12-3A0A0B4J271 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
TRAV12-3A0A0B4J271 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV12-3A0A0B4J271 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV12-3A0A0B4J271 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV12-3A0A0B4J271 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV12-3A0A0B4J271 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV12-3A0A0B4J271 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TRAV12-3A0A0B4J271 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV12-3A0A0B4J271 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC17.79■□□□□ 0.44
TRAV12-3A0A0B4J271 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TRAV12-3A0A0B4J271 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV12-3A0A0B4J271 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC17.78■□□□□ 0.44
TRAV12-3A0A0B4J271 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV12-3A0A0B4J271 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TRAV12-3A0A0B4J271 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV12-3A0A0B4J271 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV12-3A0A0B4J271 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC17.78■□□□□ 0.44
TRAV12-3A0A0B4J271 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC17.78■□□□□ 0.44
TRAV12-3A0A0B4J271 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC17.78■□□□□ 0.44
TRAV12-3A0A0B4J271 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
TRAV12-3A0A0B4J271 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TRAV12-3A0A0B4J271 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV12-3A0A0B4J271 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV12-3A0A0B4J271 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV12-3A0A0B4J271 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
TRAV12-3A0A0B4J271 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRAV12-3A0A0B4J271 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV12-3A0A0B4J271 CEBPA-AS1-201ENST00000592982 2198 ntBASIC17.76■□□□□ 0.43
TRAV12-3A0A0B4J271 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TRAV12-3A0A0B4J271 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV12-3A0A0B4J271 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV12-3A0A0B4J271 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms