Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
CTDP1Q9Y5B0 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
CTDP1Q9Y5B0 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CTDP1Q9Y5B0 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CTDP1Q9Y5B0 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CTDP1Q9Y5B0 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.89■□□□□ 0.77
CTDP1Q9Y5B0 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CTDP1Q9Y5B0 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CTDP1Q9Y5B0 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CTDP1Q9Y5B0 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CTDP1Q9Y5B0 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.89■□□□□ 0.77
CTDP1Q9Y5B0 CEND1P1-201ENST00000451006 455 ntBASIC19.89■□□□□ 0.77
CTDP1Q9Y5B0 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CTDP1Q9Y5B0 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.89■□□□□ 0.77
CTDP1Q9Y5B0 CXCL1P1-201ENST00000502804 216 ntBASIC19.89■□□□□ 0.77
CTDP1Q9Y5B0 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.89■□□□□ 0.77
CTDP1Q9Y5B0 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.89■□□□□ 0.77
CTDP1Q9Y5B0 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.89■□□□□ 0.77
CTDP1Q9Y5B0 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC19.89■□□□□ 0.77
CTDP1Q9Y5B0 KRT19P2-202ENST00000557173 1012 ntBASIC19.89■□□□□ 0.77
CTDP1Q9Y5B0 PDPK2P-202ENST00000562415 1191 ntBASIC19.89■□□□□ 0.77
CTDP1Q9Y5B0 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.89■□□□□ 0.77
CTDP1Q9Y5B0 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC19.89■□□□□ 0.77
CTDP1Q9Y5B0 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC19.89■□□□□ 0.77
CTDP1Q9Y5B0 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC19.89■□□□□ 0.77
CTDP1Q9Y5B0 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
CTDP1Q9Y5B0 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.89■□□□□ 0.77
CTDP1Q9Y5B0 AC025580.3-201ENST00000617932 1424 ntBASIC19.89■□□□□ 0.77
CTDP1Q9Y5B0 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.89■□□□□ 0.77
CTDP1Q9Y5B0 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CTDP1Q9Y5B0 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CTDP1Q9Y5B0 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
CTDP1Q9Y5B0 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.88■□□□□ 0.77
CTDP1Q9Y5B0 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTDP1Q9Y5B0 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.88■□□□□ 0.77
CTDP1Q9Y5B0 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
CTDP1Q9Y5B0 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CTDP1Q9Y5B0 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.88■□□□□ 0.77
CTDP1Q9Y5B0 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC19.88■□□□□ 0.77
CTDP1Q9Y5B0 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.88■□□□□ 0.77
CTDP1Q9Y5B0 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.88■□□□□ 0.77
CTDP1Q9Y5B0 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTDP1Q9Y5B0 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.88■□□□□ 0.77
CTDP1Q9Y5B0 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.88■□□□□ 0.77
CTDP1Q9Y5B0 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CTDP1Q9Y5B0 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTDP1Q9Y5B0 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.88■□□□□ 0.77
CTDP1Q9Y5B0 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTDP1Q9Y5B0 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC19.88■□□□□ 0.77
CTDP1Q9Y5B0 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CTDP1Q9Y5B0 NEK7-201ENST00000367383 586 ntTSL 2 BASIC19.88■□□□□ 0.77
CTDP1Q9Y5B0 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CTDP1Q9Y5B0 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC19.88■□□□□ 0.77
CTDP1Q9Y5B0 AC074386.1-202ENST00000463561 864 ntBASIC19.88■□□□□ 0.77
CTDP1Q9Y5B0 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.88■□□□□ 0.77
CTDP1Q9Y5B0 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.88■□□□□ 0.77
CTDP1Q9Y5B0 OR7E47P-204ENST00000575924 449 ntBASIC19.88■□□□□ 0.77
CTDP1Q9Y5B0 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CTDP1Q9Y5B0 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTDP1Q9Y5B0 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTDP1Q9Y5B0 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTDP1Q9Y5B0 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTDP1Q9Y5B0 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC19.88■□□□□ 0.77
CTDP1Q9Y5B0 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CTDP1Q9Y5B0 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.88■□□□□ 0.77
CTDP1Q9Y5B0 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.88■□□□□ 0.77
CTDP1Q9Y5B0 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.88■□□□□ 0.77
CTDP1Q9Y5B0 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.88■□□□□ 0.77
CTDP1Q9Y5B0 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTDP1Q9Y5B0 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTDP1Q9Y5B0 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CTDP1Q9Y5B0 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTDP1Q9Y5B0 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.87■□□□□ 0.77
CTDP1Q9Y5B0 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTDP1Q9Y5B0 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTDP1Q9Y5B0 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.87■□□□□ 0.77
CTDP1Q9Y5B0 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CTDP1Q9Y5B0 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CTDP1Q9Y5B0 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTDP1Q9Y5B0 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CTDP1Q9Y5B0 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTDP1Q9Y5B0 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTDP1Q9Y5B0 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CTDP1Q9Y5B0 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTDP1Q9Y5B0 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTDP1Q9Y5B0 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTDP1Q9Y5B0 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CTDP1Q9Y5B0 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CTDP1Q9Y5B0 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC19.87■□□□□ 0.77
CTDP1Q9Y5B0 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
CTDP1Q9Y5B0 MKNK2P1-201ENST00000437526 628 ntBASIC19.87■□□□□ 0.77
CTDP1Q9Y5B0 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.87■□□□□ 0.77
CTDP1Q9Y5B0 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.87■□□□□ 0.77
CTDP1Q9Y5B0 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CTDP1Q9Y5B0 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CTDP1Q9Y5B0 AC012317.2-201ENST00000623305 2251 ntBASIC19.87■□□□□ 0.77
CTDP1Q9Y5B0 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTDP1Q9Y5B0 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTDP1Q9Y5B0 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CTDP1Q9Y5B0 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms