Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NUP35Q8NFH5 MESTP1-201ENST00000404287 994 ntBASIC12.93□□□□□ -0.34
NUP35Q8NFH5 AC133681.1-201ENST00000465482 601 ntBASIC12.93□□□□□ -0.34
NUP35Q8NFH5 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC12.93□□□□□ -0.34
NUP35Q8NFH5 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC12.93□□□□□ -0.34
NUP35Q8NFH5 WWOX-216ENST00000569818 525 ntBASIC12.93□□□□□ -0.34
NUP35Q8NFH5 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC12.93□□□□□ -0.34
NUP35Q8NFH5 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC12.93□□□□□ -0.34
NUP35Q8NFH5 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
NUP35Q8NFH5 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NUP35Q8NFH5 CABP2-204ENST00000636477 941 ntTSL 5 BASIC12.93□□□□□ -0.34
NUP35Q8NFH5 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NUP35Q8NFH5 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NUP35Q8NFH5 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NUP35Q8NFH5 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC12.93□□□□□ -0.34
NUP35Q8NFH5 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
NUP35Q8NFH5 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NUP35Q8NFH5 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NUP35Q8NFH5 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC12.93□□□□□ -0.34
NUP35Q8NFH5 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NUP35Q8NFH5 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC12.93□□□□□ -0.34
NUP35Q8NFH5 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NUP35Q8NFH5 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NUP35Q8NFH5 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NUP35Q8NFH5 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
NUP35Q8NFH5 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
NUP35Q8NFH5 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
NUP35Q8NFH5 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC12.93□□□□□ -0.34
NUP35Q8NFH5 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC12.93□□□□□ -0.34
NUP35Q8NFH5 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
NUP35Q8NFH5 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NUP35Q8NFH5 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
NUP35Q8NFH5 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NUP35Q8NFH5 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
NUP35Q8NFH5 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
NUP35Q8NFH5 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC12.92□□□□□ -0.34
NUP35Q8NFH5 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NUP35Q8NFH5 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NUP35Q8NFH5 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NUP35Q8NFH5 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
NUP35Q8NFH5 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC12.92□□□□□ -0.34
NUP35Q8NFH5 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
NUP35Q8NFH5 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NUP35Q8NFH5 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NUP35Q8NFH5 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NUP35Q8NFH5 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
NUP35Q8NFH5 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC12.92□□□□□ -0.34
NUP35Q8NFH5 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NUP35Q8NFH5 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
NUP35Q8NFH5 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NUP35Q8NFH5 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NUP35Q8NFH5 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
NUP35Q8NFH5 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NUP35Q8NFH5 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC12.92□□□□□ -0.34
NUP35Q8NFH5 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
NUP35Q8NFH5 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NUP35Q8NFH5 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NUP35Q8NFH5 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NUP35Q8NFH5 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
NUP35Q8NFH5 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
NUP35Q8NFH5 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NUP35Q8NFH5 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NUP35Q8NFH5 NCF1B-203ENST00000435988 1254 ntBASIC12.92□□□□□ -0.34
NUP35Q8NFH5 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
NUP35Q8NFH5 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NUP35Q8NFH5 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NUP35Q8NFH5 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC12.92□□□□□ -0.34
NUP35Q8NFH5 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
NUP35Q8NFH5 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC12.92□□□□□ -0.34
NUP35Q8NFH5 SLC25A1P4-201ENST00000567977 778 ntBASIC12.92□□□□□ -0.34
NUP35Q8NFH5 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC12.92□□□□□ -0.34
NUP35Q8NFH5 CR769767.2-201ENST00000622735 460 ntBASIC12.92□□□□□ -0.34
NUP35Q8NFH5 AC133041.1-202ENST00000642053 222 ntBASIC12.92□□□□□ -0.34
NUP35Q8NFH5 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
NUP35Q8NFH5 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
NUP35Q8NFH5 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NUP35Q8NFH5 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NUP35Q8NFH5 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NUP35Q8NFH5 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NUP35Q8NFH5 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NUP35Q8NFH5 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC12.92□□□□□ -0.34
NUP35Q8NFH5 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
NUP35Q8NFH5 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
NUP35Q8NFH5 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NUP35Q8NFH5 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NUP35Q8NFH5 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
NUP35Q8NFH5 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC12.92□□□□□ -0.34
NUP35Q8NFH5 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NUP35Q8NFH5 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC12.92□□□□□ -0.34
NUP35Q8NFH5 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
NUP35Q8NFH5 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NUP35Q8NFH5 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
NUP35Q8NFH5 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NUP35Q8NFH5 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
NUP35Q8NFH5 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NUP35Q8NFH5 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
NUP35Q8NFH5 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
NUP35Q8NFH5 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NUP35Q8NFH5 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
NUP35Q8NFH5 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms