Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TTC9CQ8N5M4 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC13.66□□□□□ -0.22
TTC9CQ8N5M4 SIGLEC30P-201ENST00000455569 941 ntBASIC13.66□□□□□ -0.22
TTC9CQ8N5M4 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TTC9CQ8N5M4 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC13.66□□□□□ -0.22
TTC9CQ8N5M4 MIR3652-201ENST00000579335 131 ntBASIC13.66□□□□□ -0.22
TTC9CQ8N5M4 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC13.66□□□□□ -0.22
TTC9CQ8N5M4 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TTC9CQ8N5M4 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TTC9CQ8N5M4 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TTC9CQ8N5M4 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TTC9CQ8N5M4 RHBDF1P1-201ENST00000427504 1941 ntBASIC13.66□□□□□ -0.22
TTC9CQ8N5M4 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
TTC9CQ8N5M4 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TTC9CQ8N5M4 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TTC9CQ8N5M4 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC13.66□□□□□ -0.22
TTC9CQ8N5M4 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TTC9CQ8N5M4 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TTC9CQ8N5M4 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TTC9CQ8N5M4 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC13.66□□□□□ -0.22
TTC9CQ8N5M4 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TTC9CQ8N5M4 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TTC9CQ8N5M4 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC13.65□□□□□ -0.22
TTC9CQ8N5M4 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TTC9CQ8N5M4 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TTC9CQ8N5M4 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TTC9CQ8N5M4 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TTC9CQ8N5M4 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
TTC9CQ8N5M4 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
TTC9CQ8N5M4 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TTC9CQ8N5M4 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC13.65□□□□□ -0.22
TTC9CQ8N5M4 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
TTC9CQ8N5M4 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TTC9CQ8N5M4 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TTC9CQ8N5M4 LINC02012-201ENST00000608206 1725 ntBASIC13.65□□□□□ -0.22
TTC9CQ8N5M4 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TTC9CQ8N5M4 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
TTC9CQ8N5M4 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TTC9CQ8N5M4 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TTC9CQ8N5M4 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC13.65□□□□□ -0.22
TTC9CQ8N5M4 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TTC9CQ8N5M4 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC13.65□□□□□ -0.22
TTC9CQ8N5M4 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC13.65□□□□□ -0.22
TTC9CQ8N5M4 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC13.65□□□□□ -0.22
TTC9CQ8N5M4 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TTC9CQ8N5M4 HCG4P8-203ENST00000443049 980 ntBASIC13.65□□□□□ -0.22
TTC9CQ8N5M4 RBSN-204ENST00000449050 903 ntTSL 2 BASIC13.65□□□□□ -0.22
TTC9CQ8N5M4 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
TTC9CQ8N5M4 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC13.65□□□□□ -0.22
TTC9CQ8N5M4 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC13.65□□□□□ -0.22
TTC9CQ8N5M4 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC13.65□□□□□ -0.22
TTC9CQ8N5M4 AC138894.3-201ENST00000603787 634 ntBASIC13.65□□□□□ -0.22
TTC9CQ8N5M4 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
TTC9CQ8N5M4 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC13.65□□□□□ -0.22
TTC9CQ8N5M4 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TTC9CQ8N5M4 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TTC9CQ8N5M4 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TTC9CQ8N5M4 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TTC9CQ8N5M4 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
TTC9CQ8N5M4 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TTC9CQ8N5M4 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
TTC9CQ8N5M4 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TTC9CQ8N5M4 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC13.65□□□□□ -0.22
TTC9CQ8N5M4 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TTC9CQ8N5M4 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TTC9CQ8N5M4 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TTC9CQ8N5M4 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TTC9CQ8N5M4 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC13.65□□□□□ -0.22
TTC9CQ8N5M4 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TTC9CQ8N5M4 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TTC9CQ8N5M4 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TTC9CQ8N5M4 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
TTC9CQ8N5M4 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TTC9CQ8N5M4 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TTC9CQ8N5M4 AL121761.2-201ENST00000598007 1648 ntBASIC13.64□□□□□ -0.23
TTC9CQ8N5M4 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TTC9CQ8N5M4 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
TTC9CQ8N5M4 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
TTC9CQ8N5M4 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TTC9CQ8N5M4 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC13.64□□□□□ -0.23
TTC9CQ8N5M4 AC099398.1-201ENST00000567919 2776 ntBASIC13.64□□□□□ -0.23
TTC9CQ8N5M4 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TTC9CQ8N5M4 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TTC9CQ8N5M4 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC13.64□□□□□ -0.23
TTC9CQ8N5M4 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TTC9CQ8N5M4 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC13.64□□□□□ -0.23
TTC9CQ8N5M4 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TTC9CQ8N5M4 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TTC9CQ8N5M4 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TTC9CQ8N5M4 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TTC9CQ8N5M4 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TTC9CQ8N5M4 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TTC9CQ8N5M4 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TTC9CQ8N5M4 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TTC9CQ8N5M4 TLE1-202ENST00000376484 666 ntTSL 3 BASIC13.64□□□□□ -0.23
TTC9CQ8N5M4 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TTC9CQ8N5M4 SLC25A1P3-201ENST00000395415 828 ntBASIC13.64□□□□□ -0.23
TTC9CQ8N5M4 SPDYE21P-201ENST00000413323 827 ntBASIC13.64□□□□□ -0.23
TTC9CQ8N5M4 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC13.64□□□□□ -0.23
TTC9CQ8N5M4 FOSL1P1-201ENST00000511041 816 ntBASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms