Protein–RNA interactions for Protein: Q6W3E5

GDPD4, Glycerophosphodiester phosphodiesterase domain-containing protein 4, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD4Q6W3E5 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
GDPD4Q6W3E5 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.25■□□□□ 0.35
GDPD4Q6W3E5 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GDPD4Q6W3E5 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
GDPD4Q6W3E5 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
GDPD4Q6W3E5 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GDPD4Q6W3E5 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GDPD4Q6W3E5 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GDPD4Q6W3E5 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GDPD4Q6W3E5 KRT18P2-201ENST00000447938 1258 ntBASIC17.25■□□□□ 0.35
GDPD4Q6W3E5 AC087163.2-201ENST00000457299 853 ntBASIC17.25■□□□□ 0.35
GDPD4Q6W3E5 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.25■□□□□ 0.35
GDPD4Q6W3E5 PGAM5P1-201ENST00000518923 814 ntBASIC17.25■□□□□ 0.35
GDPD4Q6W3E5 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.25■□□□□ 0.35
GDPD4Q6W3E5 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
GDPD4Q6W3E5 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
GDPD4Q6W3E5 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
GDPD4Q6W3E5 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GDPD4Q6W3E5 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.25■□□□□ 0.35
GDPD4Q6W3E5 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GDPD4Q6W3E5 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GDPD4Q6W3E5 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GDPD4Q6W3E5 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.25■□□□□ 0.35
GDPD4Q6W3E5 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GDPD4Q6W3E5 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
GDPD4Q6W3E5 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.25■□□□□ 0.35
GDPD4Q6W3E5 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.25■□□□□ 0.35
GDPD4Q6W3E5 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
GDPD4Q6W3E5 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GDPD4Q6W3E5 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
GDPD4Q6W3E5 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
GDPD4Q6W3E5 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.24■□□□□ 0.35
GDPD4Q6W3E5 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GDPD4Q6W3E5 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
GDPD4Q6W3E5 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.24■□□□□ 0.35
GDPD4Q6W3E5 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GDPD4Q6W3E5 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GDPD4Q6W3E5 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.24■□□□□ 0.35
GDPD4Q6W3E5 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.24■□□□□ 0.35
GDPD4Q6W3E5 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.24■□□□□ 0.35
GDPD4Q6W3E5 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.24■□□□□ 0.35
GDPD4Q6W3E5 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.24■□□□□ 0.35
GDPD4Q6W3E5 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GDPD4Q6W3E5 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.24■□□□□ 0.35
GDPD4Q6W3E5 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.24■□□□□ 0.35
GDPD4Q6W3E5 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.24■□□□□ 0.35
GDPD4Q6W3E5 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GDPD4Q6W3E5 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
GDPD4Q6W3E5 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GDPD4Q6W3E5 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
GDPD4Q6W3E5 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
GDPD4Q6W3E5 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GDPD4Q6W3E5 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GDPD4Q6W3E5 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.24■□□□□ 0.35
GDPD4Q6W3E5 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GDPD4Q6W3E5 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
GDPD4Q6W3E5 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GDPD4Q6W3E5 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
GDPD4Q6W3E5 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.23■□□□□ 0.35
GDPD4Q6W3E5 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.23■□□□□ 0.35
GDPD4Q6W3E5 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GDPD4Q6W3E5 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.23■□□□□ 0.35
GDPD4Q6W3E5 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GDPD4Q6W3E5 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GDPD4Q6W3E5 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
GDPD4Q6W3E5 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.23■□□□□ 0.35
GDPD4Q6W3E5 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
GDPD4Q6W3E5 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GDPD4Q6W3E5 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
GDPD4Q6W3E5 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GDPD4Q6W3E5 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GDPD4Q6W3E5 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
GDPD4Q6W3E5 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
GDPD4Q6W3E5 IGLL3P-201ENST00000412472 434 ntBASIC17.23■□□□□ 0.35
GDPD4Q6W3E5 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
GDPD4Q6W3E5 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GDPD4Q6W3E5 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
GDPD4Q6W3E5 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.23■□□□□ 0.35
GDPD4Q6W3E5 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.23■□□□□ 0.35
GDPD4Q6W3E5 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.23■□□□□ 0.35
GDPD4Q6W3E5 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.23■□□□□ 0.35
GDPD4Q6W3E5 AC040169.1-201ENST00000565382 521 ntBASIC17.23■□□□□ 0.35
GDPD4Q6W3E5 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.23■□□□□ 0.35
GDPD4Q6W3E5 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.23■□□□□ 0.35
GDPD4Q6W3E5 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.23■□□□□ 0.35
GDPD4Q6W3E5 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GDPD4Q6W3E5 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GDPD4Q6W3E5 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.23■□□□□ 0.35
GDPD4Q6W3E5 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
GDPD4Q6W3E5 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.23■□□□□ 0.35
GDPD4Q6W3E5 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GDPD4Q6W3E5 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
GDPD4Q6W3E5 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GDPD4Q6W3E5 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GDPD4Q6W3E5 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.23■□□□□ 0.35
GDPD4Q6W3E5 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.23■□□□□ 0.35
GDPD4Q6W3E5 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GDPD4Q6W3E5 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GDPD4Q6W3E5 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GDPD4Q6W3E5 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms