Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PPP4R3AQ6IN85 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PPP4R3AQ6IN85 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC19.59■□□□□ 0.73
PPP4R3AQ6IN85 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PPP4R3AQ6IN85 RPS2P28-201ENST00000314255 741 ntBASIC19.59■□□□□ 0.73
PPP4R3AQ6IN85 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.59■□□□□ 0.73
PPP4R3AQ6IN85 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PPP4R3AQ6IN85 FDX1P1-201ENST00000449115 551 ntBASIC19.59■□□□□ 0.73
PPP4R3AQ6IN85 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.59■□□□□ 0.73
PPP4R3AQ6IN85 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.59■□□□□ 0.73
PPP4R3AQ6IN85 AC006557.2-201ENST00000592985 1240 ntBASIC19.59■□□□□ 0.73
PPP4R3AQ6IN85 FAM215A-202ENST00000632077 792 ntBASIC19.59■□□□□ 0.73
PPP4R3AQ6IN85 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
PPP4R3AQ6IN85 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PPP4R3AQ6IN85 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PPP4R3AQ6IN85 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
PPP4R3AQ6IN85 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PPP4R3AQ6IN85 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.59■□□□□ 0.73
PPP4R3AQ6IN85 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC19.59■□□□□ 0.73
PPP4R3AQ6IN85 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC19.59■□□□□ 0.73
PPP4R3AQ6IN85 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PPP4R3AQ6IN85 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PPP4R3AQ6IN85 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.59■□□□□ 0.73
PPP4R3AQ6IN85 AC108860.2-201ENST00000562760 2183 ntBASIC19.59■□□□□ 0.73
PPP4R3AQ6IN85 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PPP4R3AQ6IN85 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PPP4R3AQ6IN85 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.58■□□□□ 0.73
PPP4R3AQ6IN85 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PPP4R3AQ6IN85 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PPP4R3AQ6IN85 AL590787.1-201ENST00000568856 1315 ntBASIC19.58■□□□□ 0.73
PPP4R3AQ6IN85 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PPP4R3AQ6IN85 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PPP4R3AQ6IN85 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
PPP4R3AQ6IN85 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
PPP4R3AQ6IN85 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PPP4R3AQ6IN85 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
PPP4R3AQ6IN85 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PPP4R3AQ6IN85 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
PPP4R3AQ6IN85 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PPP4R3AQ6IN85 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
PPP4R3AQ6IN85 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.58■□□□□ 0.72
PPP4R3AQ6IN85 AL031284.1-201ENST00000419297 478 ntBASIC19.58■□□□□ 0.72
PPP4R3AQ6IN85 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PPP4R3AQ6IN85 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PPP4R3AQ6IN85 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PPP4R3AQ6IN85 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.58■□□□□ 0.72
PPP4R3AQ6IN85 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC19.58■□□□□ 0.72
PPP4R3AQ6IN85 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC19.58■□□□□ 0.72
PPP4R3AQ6IN85 AC008735.5-201ENST00000623544 497 ntBASIC19.58■□□□□ 0.72
PPP4R3AQ6IN85 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PPP4R3AQ6IN85 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PPP4R3AQ6IN85 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.58■□□□□ 0.72
PPP4R3AQ6IN85 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.58■□□□□ 0.72
PPP4R3AQ6IN85 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
PPP4R3AQ6IN85 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
PPP4R3AQ6IN85 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PPP4R3AQ6IN85 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PPP4R3AQ6IN85 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
PPP4R3AQ6IN85 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PPP4R3AQ6IN85 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC19.57■□□□□ 0.72
PPP4R3AQ6IN85 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PPP4R3AQ6IN85 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
PPP4R3AQ6IN85 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PPP4R3AQ6IN85 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PPP4R3AQ6IN85 GPR89P-201ENST00000407924 1495 ntBASIC19.57■□□□□ 0.72
PPP4R3AQ6IN85 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PPP4R3AQ6IN85 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PPP4R3AQ6IN85 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PPP4R3AQ6IN85 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PPP4R3AQ6IN85 AC073621.1-201ENST00000392730 636 ntBASIC19.57■□□□□ 0.72
PPP4R3AQ6IN85 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.57■□□□□ 0.72
PPP4R3AQ6IN85 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.57■□□□□ 0.72
PPP4R3AQ6IN85 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.57■□□□□ 0.72
PPP4R3AQ6IN85 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC19.57■□□□□ 0.72
PPP4R3AQ6IN85 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PPP4R3AQ6IN85 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.57■□□□□ 0.72
PPP4R3AQ6IN85 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC19.57■□□□□ 0.72
PPP4R3AQ6IN85 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PPP4R3AQ6IN85 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PPP4R3AQ6IN85 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
PPP4R3AQ6IN85 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PPP4R3AQ6IN85 EGFEM1P-202ENST00000431685 1563 ntBASIC19.57■□□□□ 0.72
PPP4R3AQ6IN85 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PPP4R3AQ6IN85 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PPP4R3AQ6IN85 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PPP4R3AQ6IN85 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PPP4R3AQ6IN85 HLA-A-201ENST00000376802 1334 ntBASIC19.56■□□□□ 0.72
PPP4R3AQ6IN85 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PPP4R3AQ6IN85 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PPP4R3AQ6IN85 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PPP4R3AQ6IN85 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PPP4R3AQ6IN85 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.56■□□□□ 0.72
PPP4R3AQ6IN85 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.56■□□□□ 0.72
PPP4R3AQ6IN85 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.56■□□□□ 0.72
PPP4R3AQ6IN85 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.56■□□□□ 0.72
PPP4R3AQ6IN85 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PPP4R3AQ6IN85 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PPP4R3AQ6IN85 RHBDF1P1-201ENST00000427504 1941 ntBASIC19.56■□□□□ 0.72
PPP4R3AQ6IN85 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.56■□□□□ 0.72
PPP4R3AQ6IN85 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms