Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC38Q5VT99 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC38Q5VT99 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC38Q5VT99 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC38Q5VT99 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.89■□□□□ 0.45
LRRC38Q5VT99 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.89■□□□□ 0.45
LRRC38Q5VT99 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.89■□□□□ 0.45
LRRC38Q5VT99 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
LRRC38Q5VT99 AL591684.3-201ENST00000605187 298 ntBASIC17.89■□□□□ 0.45
LRRC38Q5VT99 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
LRRC38Q5VT99 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.89■□□□□ 0.45
LRRC38Q5VT99 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC38Q5VT99 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.89■□□□□ 0.45
LRRC38Q5VT99 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC38Q5VT99 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC38Q5VT99 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC38Q5VT99 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
LRRC38Q5VT99 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.89■□□□□ 0.45
LRRC38Q5VT99 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC38Q5VT99 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC38Q5VT99 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC38Q5VT99 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
LRRC38Q5VT99 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.88■□□□□ 0.45
LRRC38Q5VT99 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.88■□□□□ 0.45
LRRC38Q5VT99 AC097637.2-201ENST00000624096 1997 ntBASIC17.88■□□□□ 0.45
LRRC38Q5VT99 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.88■□□□□ 0.45
LRRC38Q5VT99 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC38Q5VT99 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
LRRC38Q5VT99 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC38Q5VT99 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.88■□□□□ 0.45
LRRC38Q5VT99 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC38Q5VT99 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC38Q5VT99 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC38Q5VT99 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC38Q5VT99 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.88■□□□□ 0.45
LRRC38Q5VT99 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC38Q5VT99 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
LRRC38Q5VT99 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.88■□□□□ 0.45
LRRC38Q5VT99 DUX4L17-201ENST00000557360 1267 ntBASIC17.88■□□□□ 0.45
LRRC38Q5VT99 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.88■□□□□ 0.45
LRRC38Q5VT99 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.88■□□□□ 0.45
LRRC38Q5VT99 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
LRRC38Q5VT99 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.88■□□□□ 0.45
LRRC38Q5VT99 AC010331.1-201ENST00000611423 582 ntBASIC17.88■□□□□ 0.45
LRRC38Q5VT99 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC38Q5VT99 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
LRRC38Q5VT99 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC38Q5VT99 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC38Q5VT99 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.88■□□□□ 0.45
LRRC38Q5VT99 AP005117.1-201ENST00000584346 1413 ntBASIC17.88■□□□□ 0.45
LRRC38Q5VT99 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC38Q5VT99 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
LRRC38Q5VT99 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.88■□□□□ 0.45
LRRC38Q5VT99 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
LRRC38Q5VT99 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRRC38Q5VT99 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.87■□□□□ 0.45
LRRC38Q5VT99 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRRC38Q5VT99 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRRC38Q5VT99 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
LRRC38Q5VT99 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRRC38Q5VT99 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRRC38Q5VT99 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRRC38Q5VT99 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
LRRC38Q5VT99 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRRC38Q5VT99 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
LRRC38Q5VT99 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.87■□□□□ 0.45
LRRC38Q5VT99 NUS1P2-201ENST00000417358 873 ntBASIC17.87■□□□□ 0.45
LRRC38Q5VT99 LINC00982-205ENST00000420957 435 ntBASIC17.87■□□□□ 0.45
LRRC38Q5VT99 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.87■□□□□ 0.45
LRRC38Q5VT99 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.87■□□□□ 0.45
LRRC38Q5VT99 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRRC38Q5VT99 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.87■□□□□ 0.45
LRRC38Q5VT99 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.87■□□□□ 0.45
LRRC38Q5VT99 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.87■□□□□ 0.45
LRRC38Q5VT99 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
LRRC38Q5VT99 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.87■□□□□ 0.45
LRRC38Q5VT99 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.87■□□□□ 0.45
LRRC38Q5VT99 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRRC38Q5VT99 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
LRRC38Q5VT99 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRRC38Q5VT99 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.87■□□□□ 0.45
LRRC38Q5VT99 PCDHA14-201ENST00000506751 2298 ntBASIC17.87■□□□□ 0.45
LRRC38Q5VT99 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRRC38Q5VT99 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
LRRC38Q5VT99 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.87■□□□□ 0.45
LRRC38Q5VT99 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRRC38Q5VT99 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC38Q5VT99 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
LRRC38Q5VT99 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC38Q5VT99 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC38Q5VT99 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC38Q5VT99 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC38Q5VT99 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC38Q5VT99 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC38Q5VT99 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC38Q5VT99 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
LRRC38Q5VT99 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC38Q5VT99 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.86■□□□□ 0.45
LRRC38Q5VT99 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC38Q5VT99 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms