Protein–RNA interactions for Protein: Q3SY56

SP6, Transcription factor Sp6, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP6Q3SY56 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SP6Q3SY56 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SP6Q3SY56 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.35□□□□□ -0.11
SP6Q3SY56 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SP6Q3SY56 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SP6Q3SY56 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SP6Q3SY56 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SP6Q3SY56 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SP6Q3SY56 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SP6Q3SY56 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
SP6Q3SY56 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SP6Q3SY56 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
SP6Q3SY56 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SP6Q3SY56 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SP6Q3SY56 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.34□□□□□ -0.11
SP6Q3SY56 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SP6Q3SY56 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.34□□□□□ -0.11
SP6Q3SY56 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SP6Q3SY56 ADM-208ENST00000534464 1640 ntTSL 2 BASIC14.34□□□□□ -0.11
SP6Q3SY56 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SP6Q3SY56 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.34□□□□□ -0.11
SP6Q3SY56 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SP6Q3SY56 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.34□□□□□ -0.11
SP6Q3SY56 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SP6Q3SY56 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SP6Q3SY56 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
SP6Q3SY56 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SP6Q3SY56 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SP6Q3SY56 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SP6Q3SY56 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SP6Q3SY56 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SP6Q3SY56 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SP6Q3SY56 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SP6Q3SY56 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SP6Q3SY56 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SP6Q3SY56 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SP6Q3SY56 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SP6Q3SY56 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SP6Q3SY56 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC14.34□□□□□ -0.11
SP6Q3SY56 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SP6Q3SY56 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SP6Q3SY56 TSPY12P-201ENST00000421279 868 ntBASIC14.34□□□□□ -0.11
SP6Q3SY56 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC14.34□□□□□ -0.11
SP6Q3SY56 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.34□□□□□ -0.11
SP6Q3SY56 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SP6Q3SY56 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SP6Q3SY56 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
SP6Q3SY56 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SP6Q3SY56 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SP6Q3SY56 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
SP6Q3SY56 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SP6Q3SY56 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SP6Q3SY56 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC14.34□□□□□ -0.11
SP6Q3SY56 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SP6Q3SY56 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.34□□□□□ -0.11
SP6Q3SY56 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SP6Q3SY56 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.34□□□□□ -0.11
SP6Q3SY56 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SP6Q3SY56 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
SP6Q3SY56 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SP6Q3SY56 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SP6Q3SY56 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC14.34□□□□□ -0.11
SP6Q3SY56 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SP6Q3SY56 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.34□□□□□ -0.11
SP6Q3SY56 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SP6Q3SY56 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
SP6Q3SY56 PC-208ENST00000529047 1607 ntTSL 3 BASIC14.33□□□□□ -0.11
SP6Q3SY56 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.33□□□□□ -0.11
SP6Q3SY56 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.33□□□□□ -0.11
SP6Q3SY56 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
SP6Q3SY56 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
SP6Q3SY56 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SP6Q3SY56 AC092364.2-201ENST00000596710 2692 ntBASIC14.33□□□□□ -0.12
SP6Q3SY56 KRT89P-201ENST00000620027 1478 ntBASIC14.33□□□□□ -0.12
SP6Q3SY56 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SP6Q3SY56 PAUPAR-201ENST00000630360 2965 ntBASIC14.33□□□□□ -0.12
SP6Q3SY56 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
SP6Q3SY56 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SP6Q3SY56 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SP6Q3SY56 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SP6Q3SY56 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SP6Q3SY56 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SP6Q3SY56 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SP6Q3SY56 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SP6Q3SY56 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SP6Q3SY56 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC14.33□□□□□ -0.12
SP6Q3SY56 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC14.33□□□□□ -0.12
SP6Q3SY56 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC14.33□□□□□ -0.12
SP6Q3SY56 AL512604.3-201ENST00000569583 964 ntBASIC14.33□□□□□ -0.12
SP6Q3SY56 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC14.33□□□□□ -0.12
SP6Q3SY56 MIR4785-201ENST00000585005 73 ntBASIC14.33□□□□□ -0.12
SP6Q3SY56 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
SP6Q3SY56 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SP6Q3SY56 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC14.33□□□□□ -0.12
SP6Q3SY56 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SP6Q3SY56 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SP6Q3SY56 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.33□□□□□ -0.12
SP6Q3SY56 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SP6Q3SY56 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SP6Q3SY56 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms