Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RAE1P78406 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAE1P78406 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
RAE1P78406 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAE1P78406 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
RAE1P78406 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAE1P78406 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAE1P78406 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.34■□□□□ 0.21
RAE1P78406 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.34■□□□□ 0.21
RAE1P78406 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.34■□□□□ 0.21
RAE1P78406 HCG4P8-203ENST00000443049 980 ntBASIC16.34■□□□□ 0.21
RAE1P78406 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.34■□□□□ 0.21
RAE1P78406 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
RAE1P78406 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.34■□□□□ 0.21
RAE1P78406 DUX4L17-201ENST00000557360 1267 ntBASIC16.34■□□□□ 0.21
RAE1P78406 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.34■□□□□ 0.21
RAE1P78406 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAE1P78406 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.34■□□□□ 0.21
RAE1P78406 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
RAE1P78406 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAE1P78406 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAE1P78406 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
RAE1P78406 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.34■□□□□ 0.21
RAE1P78406 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
RAE1P78406 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAE1P78406 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RAE1P78406 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAE1P78406 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RAE1P78406 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.34■□□□□ 0.21
RAE1P78406 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.34■□□□□ 0.21
RAE1P78406 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
RAE1P78406 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
RAE1P78406 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
RAE1P78406 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RAE1P78406 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.21
RAE1P78406 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RAE1P78406 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RAE1P78406 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RAE1P78406 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RAE1P78406 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.33■□□□□ 0.21
RAE1P78406 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RAE1P78406 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.33■□□□□ 0.21
RAE1P78406 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RAE1P78406 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAE1P78406 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAE1P78406 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAE1P78406 PCDHB17P-201ENST00000539533 2393 ntBASIC16.33■□□□□ 0.2
RAE1P78406 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAE1P78406 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAE1P78406 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.33■□□□□ 0.2
RAE1P78406 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAE1P78406 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAE1P78406 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.33■□□□□ 0.2
RAE1P78406 PRYP5-201ENST00000451909 266 ntBASIC16.33■□□□□ 0.2
RAE1P78406 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.33■□□□□ 0.2
RAE1P78406 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.33■□□□□ 0.2
RAE1P78406 MIR3652-201ENST00000579335 131 ntBASIC16.33■□□□□ 0.2
RAE1P78406 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.33■□□□□ 0.2
RAE1P78406 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAE1P78406 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.33■□□□□ 0.2
RAE1P78406 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.33■□□□□ 0.2
RAE1P78406 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.33■□□□□ 0.2
RAE1P78406 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAE1P78406 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.33■□□□□ 0.2
RAE1P78406 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.33■□□□□ 0.2
RAE1P78406 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.33■□□□□ 0.2
RAE1P78406 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAE1P78406 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
RAE1P78406 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAE1P78406 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
RAE1P78406 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
RAE1P78406 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAE1P78406 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAE1P78406 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAE1P78406 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAE1P78406 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAE1P78406 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAE1P78406 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAE1P78406 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAE1P78406 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAE1P78406 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAE1P78406 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.32■□□□□ 0.2
RAE1P78406 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RAE1P78406 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.32■□□□□ 0.2
RAE1P78406 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAE1P78406 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAE1P78406 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.32■□□□□ 0.2
RAE1P78406 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.32■□□□□ 0.2
RAE1P78406 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.32■□□□□ 0.2
RAE1P78406 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAE1P78406 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.32■□□□□ 0.2
RAE1P78406 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAE1P78406 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAE1P78406 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.32■□□□□ 0.2
RAE1P78406 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAE1P78406 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.32■□□□□ 0.2
RAE1P78406 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.32■□□□□ 0.2
RAE1P78406 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.32■□□□□ 0.2
RAE1P78406 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.32■□□□□ 0.2
RAE1P78406 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms