Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.47■□□□□ 0.39
RPA3P35244 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
RPA3P35244 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPA3P35244 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPA3P35244 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.47■□□□□ 0.39
RPA3P35244 AC093525.9-201ENST00000624961 1746 ntBASIC17.47■□□□□ 0.39
RPA3P35244 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RPA3P35244 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RPA3P35244 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPA3P35244 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.47■□□□□ 0.39
RPA3P35244 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPA3P35244 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RPA3P35244 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPA3P35244 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.47■□□□□ 0.39
RPA3P35244 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPA3P35244 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.47■□□□□ 0.39
RPA3P35244 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.47■□□□□ 0.39
RPA3P35244 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.47■□□□□ 0.39
RPA3P35244 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.47■□□□□ 0.39
RPA3P35244 AC091076.1-201ENST00000610741 619 ntBASIC17.47■□□□□ 0.39
RPA3P35244 AL358472.4-201ENST00000633140 710 ntBASIC17.47■□□□□ 0.39
RPA3P35244 AP000550.4-202ENST00000639755 178 ntBASIC17.47■□□□□ 0.39
RPA3P35244 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPA3P35244 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPA3P35244 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.47■□□□□ 0.39
RPA3P35244 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.47■□□□□ 0.39
RPA3P35244 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.47■□□□□ 0.39
RPA3P35244 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.47■□□□□ 0.39
RPA3P35244 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.47■□□□□ 0.39
RPA3P35244 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.47■□□□□ 0.39
RPA3P35244 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
RPA3P35244 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPA3P35244 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
RPA3P35244 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.47■□□□□ 0.39
RPA3P35244 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPA3P35244 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPA3P35244 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.47■□□□□ 0.39
RPA3P35244 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.47■□□□□ 0.39
RPA3P35244 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPA3P35244 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
RPA3P35244 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPA3P35244 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.47■□□□□ 0.39
RPA3P35244 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.47■□□□□ 0.39
RPA3P35244 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPA3P35244 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPA3P35244 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RPA3P35244 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPA3P35244 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPA3P35244 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
RPA3P35244 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPA3P35244 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.46■□□□□ 0.39
RPA3P35244 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPA3P35244 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RPA3P35244 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPA3P35244 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RPA3P35244 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.46■□□□□ 0.39
RPA3P35244 AC116407.4-201ENST00000623319 1061 ntBASIC17.46■□□□□ 0.39
RPA3P35244 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
RPA3P35244 AC026691.1-201ENST00000602502 2017 ntBASIC17.46■□□□□ 0.39
RPA3P35244 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
RPA3P35244 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPA3P35244 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RPA3P35244 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.46■□□□□ 0.39
RPA3P35244 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPA3P35244 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RPA3P35244 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPA3P35244 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
RPA3P35244 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
RPA3P35244 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.46■□□□□ 0.38
RPA3P35244 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
RPA3P35244 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.45■□□□□ 0.38
RPA3P35244 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
RPA3P35244 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.45■□□□□ 0.38
RPA3P35244 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RPA3P35244 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.45■□□□□ 0.38
RPA3P35244 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RPA3P35244 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.45■□□□□ 0.38
RPA3P35244 PCDHB17P-201ENST00000539533 2393 ntBASIC17.45■□□□□ 0.38
RPA3P35244 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RPA3P35244 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RPA3P35244 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RPA3P35244 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RPA3P35244 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.45■□□□□ 0.38
RPA3P35244 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RPA3P35244 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RPA3P35244 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.45■□□□□ 0.38
RPA3P35244 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RPA3P35244 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.45■□□□□ 0.38
RPA3P35244 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.45■□□□□ 0.38
RPA3P35244 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RPA3P35244 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.45■□□□□ 0.38
RPA3P35244 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RPA3P35244 BX276092.5-203ENST00000456199 560 ntBASIC17.45■□□□□ 0.38
RPA3P35244 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.45■□□□□ 0.38
RPA3P35244 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.45■□□□□ 0.38
RPA3P35244 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.45■□□□□ 0.38
RPA3P35244 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.45■□□□□ 0.38
RPA3P35244 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RPA3P35244 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RPA3P35244 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms