Protein–RNA interactions for Protein: P30926

CHRNB4, Neuronal acetylcholine receptor subunit beta-4, humanhuman

Predictions only

Length 498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4P30926 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
CHRNB4P30926 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.27■□□□□ 0.03
CHRNB4P30926 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CHRNB4P30926 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNB4P30926 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC15.26■□□□□ 0.03
CHRNB4P30926 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNB4P30926 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNB4P30926 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNB4P30926 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.26■□□□□ 0.03
CHRNB4P30926 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNB4P30926 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNB4P30926 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNB4P30926 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNB4P30926 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNB4P30926 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNB4P30926 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNB4P30926 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.26■□□□□ 0.03
CHRNB4P30926 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.26■□□□□ 0.03
CHRNB4P30926 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNB4P30926 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNB4P30926 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.26■□□□□ 0.03
CHRNB4P30926 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.26■□□□□ 0.03
CHRNB4P30926 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.26■□□□□ 0.03
CHRNB4P30926 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.26■□□□□ 0.03
CHRNB4P30926 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.26■□□□□ 0.03
CHRNB4P30926 AC011467.4-201ENST00000594891 528 ntBASIC15.26■□□□□ 0.03
CHRNB4P30926 AC027612.4-201ENST00000605371 583 ntBASIC15.26■□□□□ 0.03
CHRNB4P30926 AC068137.2-201ENST00000605408 478 ntBASIC15.26■□□□□ 0.03
CHRNB4P30926 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.26■□□□□ 0.03
CHRNB4P30926 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNB4P30926 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.26■□□□□ 0.03
CHRNB4P30926 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.26■□□□□ 0.03
CHRNB4P30926 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNB4P30926 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNB4P30926 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNB4P30926 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.25■□□□□ 0.03
CHRNB4P30926 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNB4P30926 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
CHRNB4P30926 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNB4P30926 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNB4P30926 OR6D1P-203ENST00000641209 4860 ntBASIC15.25■□□□□ 0.03
CHRNB4P30926 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNB4P30926 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CHRNB4P30926 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.25■□□□□ 0.03
CHRNB4P30926 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNB4P30926 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CHRNB4P30926 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNB4P30926 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNB4P30926 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CHRNB4P30926 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNB4P30926 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.25■□□□□ 0.03
CHRNB4P30926 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNB4P30926 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.25■□□□□ 0.03
CHRNB4P30926 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.25■□□□□ 0.03
CHRNB4P30926 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.25■□□□□ 0.03
CHRNB4P30926 AC092364.2-202ENST00000597012 1073 ntBASIC15.25■□□□□ 0.03
CHRNB4P30926 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.25■□□□□ 0.03
CHRNB4P30926 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CHRNB4P30926 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC15.25■□□□□ 0.03
CHRNB4P30926 AC135776.1-201ENST00000319817 2481 ntBASIC15.25■□□□□ 0.03
CHRNB4P30926 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNB4P30926 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNB4P30926 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNB4P30926 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNB4P30926 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.25■□□□□ 0.03
CHRNB4P30926 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNB4P30926 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNB4P30926 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC15.25■□□□□ 0.03
CHRNB4P30926 FLYWCH1P1-201ENST00000460917 1874 ntBASIC15.25■□□□□ 0.03
CHRNB4P30926 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNB4P30926 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNB4P30926 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CHRNB4P30926 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRNB4P30926 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
CHRNB4P30926 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CHRNB4P30926 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRNB4P30926 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.24■□□□□ 0.03
CHRNB4P30926 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRNB4P30926 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
CHRNB4P30926 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRNB4P30926 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.24■□□□□ 0.03
CHRNB4P30926 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRNB4P30926 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CHRNB4P30926 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRNB4P30926 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRNB4P30926 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRNB4P30926 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CHRNB4P30926 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRNB4P30926 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.24■□□□□ 0.03
CHRNB4P30926 MIR770-201ENST00000390219 98 ntBASIC15.24■□□□□ 0.03
CHRNB4P30926 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.24■□□□□ 0.03
CHRNB4P30926 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.24■□□□□ 0.03
CHRNB4P30926 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.24■□□□□ 0.03
CHRNB4P30926 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.24■□□□□ 0.03
CHRNB4P30926 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.24■□□□□ 0.03
CHRNB4P30926 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CHRNB4P30926 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.24■□□□□ 0.03
CHRNB4P30926 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.24■□□□□ 0.03
CHRNB4P30926 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CHRNB4P30926 REXO1L3P-201ENST00000622202 1288 ntBASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms