Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
BMP4P12644 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BMP4P12644 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BMP4P12644 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
BMP4P12644 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BMP4P12644 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC15.88■□□□□ 0.13
BMP4P12644 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BMP4P12644 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
BMP4P12644 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
BMP4P12644 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
BMP4P12644 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
BMP4P12644 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BMP4P12644 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
BMP4P12644 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
BMP4P12644 KRT18P48-201ENST00000434763 852 ntBASIC15.88■□□□□ 0.13
BMP4P12644 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.88■□□□□ 0.13
BMP4P12644 BX276092.5-203ENST00000456199 560 ntBASIC15.88■□□□□ 0.13
BMP4P12644 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC15.88■□□□□ 0.13
BMP4P12644 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC15.88■□□□□ 0.13
BMP4P12644 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.88■□□□□ 0.13
BMP4P12644 MIR3180-4-201ENST00000582223 153 ntBASIC15.88■□□□□ 0.13
BMP4P12644 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC15.88■□□□□ 0.13
BMP4P12644 AL121672.3-201ENST00000608644 468 ntBASIC15.88■□□□□ 0.13
BMP4P12644 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.88■□□□□ 0.13
BMP4P12644 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.88■□□□□ 0.13
BMP4P12644 DFFB-212ENST00000625756 649 ntTSL 5 BASIC15.88■□□□□ 0.13
BMP4P12644 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.88■□□□□ 0.13
BMP4P12644 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
BMP4P12644 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.88■□□□□ 0.13
BMP4P12644 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BMP4P12644 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
BMP4P12644 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.88■□□□□ 0.13
BMP4P12644 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
BMP4P12644 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC15.88■□□□□ 0.13
BMP4P12644 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BMP4P12644 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
BMP4P12644 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.88■□□□□ 0.13
BMP4P12644 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
BMP4P12644 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
BMP4P12644 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BMP4P12644 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BMP4P12644 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.87■□□□□ 0.13
BMP4P12644 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
BMP4P12644 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.87■□□□□ 0.13
BMP4P12644 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.87■□□□□ 0.13
BMP4P12644 AC005915.1-201ENST00000624912 2018 ntBASIC15.87■□□□□ 0.13
BMP4P12644 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BMP4P12644 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
BMP4P12644 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BMP4P12644 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BMP4P12644 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC15.87■□□□□ 0.13
BMP4P12644 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.87■□□□□ 0.13
BMP4P12644 MIR564-202ENST00000385049 94 ntBASIC15.87■□□□□ 0.13
BMP4P12644 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
BMP4P12644 FXN-203ENST00000396366 922 ntTSL 2 BASIC15.87■□□□□ 0.13
BMP4P12644 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC15.87■□□□□ 0.13
BMP4P12644 SEC1P-202ENST00000473944 940 ntBASIC15.87■□□□□ 0.13
BMP4P12644 KRT18P41-201ENST00000518924 1277 ntBASIC15.87■□□□□ 0.13
BMP4P12644 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC15.87■□□□□ 0.13
BMP4P12644 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
BMP4P12644 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC15.87■□□□□ 0.13
BMP4P12644 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.87■□□□□ 0.13
BMP4P12644 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.87■□□□□ 0.13
BMP4P12644 AC011498.5-201ENST00000592027 486 ntBASIC15.87■□□□□ 0.13
BMP4P12644 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC15.87■□□□□ 0.13
BMP4P12644 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BMP4P12644 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
BMP4P12644 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
BMP4P12644 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
BMP4P12644 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
BMP4P12644 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BMP4P12644 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.87■□□□□ 0.13
BMP4P12644 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BMP4P12644 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
BMP4P12644 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BMP4P12644 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BMP4P12644 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
BMP4P12644 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BMP4P12644 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.86■□□□□ 0.13
BMP4P12644 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
BMP4P12644 LYSMD4-203ENST00000378904 2122 ntBASIC15.86■□□□□ 0.13
BMP4P12644 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
BMP4P12644 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
BMP4P12644 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
BMP4P12644 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
BMP4P12644 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
BMP4P12644 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.86■□□□□ 0.13
BMP4P12644 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
BMP4P12644 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.86■□□□□ 0.13
BMP4P12644 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
BMP4P12644 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
BMP4P12644 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
BMP4P12644 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.86■□□□□ 0.13
BMP4P12644 AC104390.1-201ENST00000555663 520 ntBASIC15.86■□□□□ 0.13
BMP4P12644 USF2-205ENST00000594064 1179 ntTSL 2 BASIC15.86■□□□□ 0.13
BMP4P12644 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC15.86■□□□□ 0.13
BMP4P12644 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC15.86■□□□□ 0.13
BMP4P12644 AC079328.2-201ENST00000561241 3354 ntBASIC15.86■□□□□ 0.13
BMP4P12644 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
BMP4P12644 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms