Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
COL11A1P12107 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL11A1P12107 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL11A1P12107 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL11A1P12107 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL11A1P12107 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL11A1P12107 MIR661-201ENST00000384842 89 ntBASIC19.37■□□□□ 0.69
COL11A1P12107 RPL30-202ENST00000396070 440 ntTSL 2 BASIC19.37■□□□□ 0.69
COL11A1P12107 CDK2AP2P3-201ENST00000422476 372 ntBASIC19.37■□□□□ 0.69
COL11A1P12107 AL671277.1-201ENST00000429656 993 ntBASIC19.37■□□□□ 0.69
COL11A1P12107 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC19.37■□□□□ 0.69
COL11A1P12107 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC19.37■□□□□ 0.69
COL11A1P12107 AC005237.2-201ENST00000434368 219 ntBASIC19.37■□□□□ 0.69
COL11A1P12107 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
COL11A1P12107 AQP6-203ENST00000551733 849 ntTSL 3 BASIC19.37■□□□□ 0.69
COL11A1P12107 MIR6080-201ENST00000617359 66 ntBASIC19.37■□□□□ 0.69
COL11A1P12107 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC19.37■□□□□ 0.69
COL11A1P12107 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.37■□□□□ 0.69
COL11A1P12107 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL11A1P12107 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL11A1P12107 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COL11A1P12107 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL11A1P12107 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL11A1P12107 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
COL11A1P12107 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL11A1P12107 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL11A1P12107 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.36■□□□□ 0.69
COL11A1P12107 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL11A1P12107 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL11A1P12107 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL11A1P12107 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COL11A1P12107 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL11A1P12107 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC19.36■□□□□ 0.69
COL11A1P12107 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC19.36■□□□□ 0.69
COL11A1P12107 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC19.36■□□□□ 0.69
COL11A1P12107 AC008677.1-201ENST00000519230 1561 ntBASIC19.36■□□□□ 0.69
COL11A1P12107 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL11A1P12107 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC19.36■□□□□ 0.69
COL11A1P12107 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
COL11A1P12107 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COL11A1P12107 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL11A1P12107 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC19.36■□□□□ 0.69
COL11A1P12107 AC084121.4-201ENST00000641598 221 ntBASIC19.36■□□□□ 0.69
COL11A1P12107 AF228730.8-201ENST00000642140 221 ntBASIC19.36■□□□□ 0.69
COL11A1P12107 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COL11A1P12107 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19.36■□□□□ 0.69
COL11A1P12107 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COL11A1P12107 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COL11A1P12107 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COL11A1P12107 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COL11A1P12107 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL11A1P12107 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COL11A1P12107 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC19.35■□□□□ 0.69
COL11A1P12107 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL11A1P12107 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COL11A1P12107 BAD-202ENST00000394531 631 ntTSL 3 BASIC19.35■□□□□ 0.69
COL11A1P12107 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC19.35■□□□□ 0.69
COL11A1P12107 KLF2P3-201ENST00000451977 1087 ntBASIC19.35■□□□□ 0.69
COL11A1P12107 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC19.35■□□□□ 0.69
COL11A1P12107 BAD-207ENST00000544785 525 ntTSL 3 BASIC19.35■□□□□ 0.69
COL11A1P12107 AC087641.1-201ENST00000557561 1021 ntBASIC19.35■□□□□ 0.69
COL11A1P12107 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC19.35■□□□□ 0.69
COL11A1P12107 AC091167.2-201ENST00000579581 588 ntBASIC19.35■□□□□ 0.69
COL11A1P12107 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC19.35■□□□□ 0.69
COL11A1P12107 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC19.35■□□□□ 0.69
COL11A1P12107 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
COL11A1P12107 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COL11A1P12107 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC19.35■□□□□ 0.69
COL11A1P12107 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COL11A1P12107 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COL11A1P12107 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COL11A1P12107 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.35■□□□□ 0.69
COL11A1P12107 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL11A1P12107 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.35■□□□□ 0.69
COL11A1P12107 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL11A1P12107 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.35■□□□□ 0.69
COL11A1P12107 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
COL11A1P12107 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
COL11A1P12107 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
COL11A1P12107 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL11A1P12107 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC19.35■□□□□ 0.69
COL11A1P12107 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC19.35■□□□□ 0.69
COL11A1P12107 RBPMS2P1-201ENST00000437762 623 ntBASIC19.35■□□□□ 0.69
COL11A1P12107 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC19.35■□□□□ 0.69
COL11A1P12107 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC19.35■□□□□ 0.69
COL11A1P12107 DUX4L27-201ENST00000554796 1261 ntBASIC19.35■□□□□ 0.69
COL11A1P12107 AP000842.3-202ENST00000569238 1080 ntBASIC19.35■□□□□ 0.69
COL11A1P12107 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
COL11A1P12107 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
COL11A1P12107 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL11A1P12107 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL11A1P12107 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COL11A1P12107 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL11A1P12107 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL11A1P12107 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL11A1P12107 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC19.34■□□□□ 0.69
COL11A1P12107 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
COL11A1P12107 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
COL11A1P12107 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC19.34■□□□□ 0.69
COL11A1P12107 AC069120.2-201ENST00000524091 540 ntBASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms