Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC7.59□□□□□ -1.19
USH2AO75445 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
USH2AO75445 AL590787.1-201ENST00000568856 1315 ntBASIC7.59□□□□□ -1.19
USH2AO75445 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC7.59□□□□□ -1.19
USH2AO75445 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
USH2AO75445 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC7.59□□□□□ -1.19
USH2AO75445 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
USH2AO75445 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC7.59□□□□□ -1.19
USH2AO75445 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC7.59□□□□□ -1.19
USH2AO75445 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC7.59□□□□□ -1.19
USH2AO75445 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
USH2AO75445 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
USH2AO75445 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC7.59□□□□□ -1.19
USH2AO75445 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
USH2AO75445 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
USH2AO75445 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
USH2AO75445 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
USH2AO75445 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
USH2AO75445 NSL1-201ENST00000366976 722 ntTSL 2 BASIC7.59□□□□□ -1.19
USH2AO75445 RPL28-204ENST00000431533 590 ntTSL 2 BASIC7.59□□□□□ -1.19
USH2AO75445 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
USH2AO75445 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC7.59□□□□□ -1.19
USH2AO75445 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
USH2AO75445 NEU3-202ENST00000526068 431 ntTSL 2 BASIC7.59□□□□□ -1.19
USH2AO75445 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC7.59□□□□□ -1.19
USH2AO75445 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
USH2AO75445 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC7.59□□□□□ -1.19
USH2AO75445 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC7.59□□□□□ -1.19
USH2AO75445 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
USH2AO75445 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
USH2AO75445 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
USH2AO75445 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC7.59□□□□□ -1.2
USH2AO75445 AC126763.1-201ENST00000552015 2118 ntBASIC7.59□□□□□ -1.2
USH2AO75445 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
USH2AO75445 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
USH2AO75445 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
USH2AO75445 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC7.58□□□□□ -1.2
USH2AO75445 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC7.58□□□□□ -1.2
USH2AO75445 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC7.58□□□□□ -1.2
USH2AO75445 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC7.58□□□□□ -1.2
USH2AO75445 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC7.58□□□□□ -1.2
USH2AO75445 AC020765.3-201ENST00000613051 740 ntBASIC7.58□□□□□ -1.2
USH2AO75445 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC7.58□□□□□ -1.2
USH2AO75445 MIR7845-201ENST00000618396 99 ntBASIC7.58□□□□□ -1.2
USH2AO75445 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
USH2AO75445 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC7.58□□□□□ -1.2
USH2AO75445 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
USH2AO75445 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
USH2AO75445 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
USH2AO75445 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC7.58□□□□□ -1.2
USH2AO75445 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC7.58□□□□□ -1.2
USH2AO75445 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
USH2AO75445 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC7.58□□□□□ -1.2
USH2AO75445 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC7.58□□□□□ -1.2
USH2AO75445 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC7.58□□□□□ -1.2
USH2AO75445 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC7.58□□□□□ -1.2
USH2AO75445 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC7.58□□□□□ -1.2
USH2AO75445 ACTG1P17-201ENST00000558391 1119 ntBASIC7.58□□□□□ -1.2
USH2AO75445 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC7.58□□□□□ -1.2
USH2AO75445 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
USH2AO75445 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
USH2AO75445 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
USH2AO75445 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
USH2AO75445 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
USH2AO75445 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
USH2AO75445 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC7.58□□□□□ -1.2
USH2AO75445 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC7.58□□□□□ -1.2
USH2AO75445 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
USH2AO75445 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
USH2AO75445 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
USH2AO75445 AC005229.1-201ENST00000392885 409 ntBASIC7.58□□□□□ -1.2
USH2AO75445 AC103564.2-201ENST00000432853 1299 ntBASIC7.58□□□□□ -1.2
USH2AO75445 BCRP2-202ENST00000447763 634 ntBASIC7.58□□□□□ -1.2
USH2AO75445 CTBP2P5-201ENST00000454986 1264 ntBASIC7.58□□□□□ -1.2
USH2AO75445 BCRP6-201ENST00000510112 632 ntBASIC7.58□□□□□ -1.2
USH2AO75445 BCRP7-201ENST00000511549 544 ntBASIC7.58□□□□□ -1.2
USH2AO75445 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC7.58□□□□□ -1.2
USH2AO75445 U62317.3-201ENST00000608319 855 ntBASIC7.58□□□□□ -1.2
USH2AO75445 AC007967.4-201ENST00000614700 386 ntBASIC7.58□□□□□ -1.2
USH2AO75445 AL161645.1-201ENST00000622716 1255 ntBASIC7.58□□□□□ -1.2
USH2AO75445 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
USH2AO75445 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC7.58□□□□□ -1.2
USH2AO75445 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC7.58□□□□□ -1.2
USH2AO75445 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
USH2AO75445 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
USH2AO75445 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
USH2AO75445 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC7.58□□□□□ -1.2
USH2AO75445 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
USH2AO75445 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC7.58□□□□□ -1.2
USH2AO75445 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
USH2AO75445 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
USH2AO75445 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC7.58□□□□□ -1.2
USH2AO75445 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
USH2AO75445 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
USH2AO75445 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC7.58□□□□□ -1.2
USH2AO75445 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC7.58□□□□□ -1.2
USH2AO75445 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
USH2AO75445 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
USH2AO75445 BRWD1P1-201ENST00000401091 371 ntBASIC7.58□□□□□ -1.2
USH2AO75445 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC7.58□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms