Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.48■□□□□ 0.23
PDLIM1O00151 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PDLIM1O00151 AL513523.2-202ENST00000427283 2040 ntBASIC16.48■□□□□ 0.23
PDLIM1O00151 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.48■□□□□ 0.23
PDLIM1O00151 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.47■□□□□ 0.23
PDLIM1O00151 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDLIM1O00151 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PDLIM1O00151 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PDLIM1O00151 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
PDLIM1O00151 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDLIM1O00151 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.47■□□□□ 0.23
PDLIM1O00151 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PDLIM1O00151 AC006449.5-201ENST00000610658 2098 ntBASIC16.47■□□□□ 0.23
PDLIM1O00151 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDLIM1O00151 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PDLIM1O00151 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PDLIM1O00151 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDLIM1O00151 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
PDLIM1O00151 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDLIM1O00151 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PDLIM1O00151 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDLIM1O00151 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.47■□□□□ 0.23
PDLIM1O00151 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PDLIM1O00151 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PDLIM1O00151 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PDLIM1O00151 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDLIM1O00151 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDLIM1O00151 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PDLIM1O00151 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDLIM1O00151 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PDLIM1O00151 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
PDLIM1O00151 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
PDLIM1O00151 AC117947.1-201ENST00000427448 529 ntBASIC16.47■□□□□ 0.23
PDLIM1O00151 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.47■□□□□ 0.23
PDLIM1O00151 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.47■□□□□ 0.23
PDLIM1O00151 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.47■□□□□ 0.23
PDLIM1O00151 AC009947.2-201ENST00000444014 672 ntBASIC16.47■□□□□ 0.23
PDLIM1O00151 COX11P1-201ENST00000489116 835 ntBASIC16.47■□□□□ 0.23
PDLIM1O00151 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.47■□□□□ 0.23
PDLIM1O00151 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.47■□□□□ 0.23
PDLIM1O00151 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.47■□□□□ 0.23
PDLIM1O00151 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDLIM1O00151 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PDLIM1O00151 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDLIM1O00151 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PDLIM1O00151 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDLIM1O00151 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.47■□□□□ 0.23
PDLIM1O00151 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDLIM1O00151 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.47■□□□□ 0.23
PDLIM1O00151 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.47■□□□□ 0.23
PDLIM1O00151 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDLIM1O00151 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDLIM1O00151 AC092384.3-202ENST00000564646 2873 ntBASIC16.47■□□□□ 0.23
PDLIM1O00151 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.47■□□□□ 0.23
PDLIM1O00151 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
PDLIM1O00151 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDLIM1O00151 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDLIM1O00151 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDLIM1O00151 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PDLIM1O00151 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDLIM1O00151 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDLIM1O00151 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PDLIM1O00151 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
PDLIM1O00151 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.46■□□□□ 0.23
PDLIM1O00151 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
PDLIM1O00151 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PDLIM1O00151 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.46■□□□□ 0.23
PDLIM1O00151 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.46■□□□□ 0.23
PDLIM1O00151 KRT8P7-201ENST00000533003 1432 ntBASIC16.46■□□□□ 0.23
PDLIM1O00151 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.46■□□□□ 0.23
PDLIM1O00151 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
PDLIM1O00151 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDLIM1O00151 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.46■□□□□ 0.23
PDLIM1O00151 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDLIM1O00151 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
PDLIM1O00151 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PDLIM1O00151 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PDLIM1O00151 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDLIM1O00151 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDLIM1O00151 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDLIM1O00151 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.46■□□□□ 0.23
PDLIM1O00151 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.46■□□□□ 0.23
PDLIM1O00151 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.46■□□□□ 0.23
PDLIM1O00151 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.46■□□□□ 0.23
PDLIM1O00151 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.46■□□□□ 0.23
PDLIM1O00151 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.46■□□□□ 0.23
PDLIM1O00151 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.46■□□□□ 0.23
PDLIM1O00151 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.46■□□□□ 0.23
PDLIM1O00151 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PDLIM1O00151 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PDLIM1O00151 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.46■□□□□ 0.23
PDLIM1O00151 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDLIM1O00151 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PDLIM1O00151 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.46■□□□□ 0.23
PDLIM1O00151 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PDLIM1O00151 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.46■□□□□ 0.23
PDLIM1O00151 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PDLIM1O00151 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.46■□□□□ 0.23
PDLIM1O00151 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
PDLIM1O00151 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms