Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CAPN8A6NHC0 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CAPN8A6NHC0 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.54■□□□□ 0.4
CAPN8A6NHC0 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
CAPN8A6NHC0 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.54■□□□□ 0.4
CAPN8A6NHC0 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.54■□□□□ 0.4
CAPN8A6NHC0 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN8A6NHC0 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN8A6NHC0 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN8A6NHC0 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN8A6NHC0 AC009336.1-201ENST00000608941 1553 ntBASIC17.54■□□□□ 0.4
CAPN8A6NHC0 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN8A6NHC0 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.54■□□□□ 0.4
CAPN8A6NHC0 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN8A6NHC0 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.54■□□□□ 0.4
CAPN8A6NHC0 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN8A6NHC0 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN8A6NHC0 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN8A6NHC0 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
CAPN8A6NHC0 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
CAPN8A6NHC0 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CAPN8A6NHC0 STK19B-204ENST00000512515 211 ntBASIC17.54■□□□□ 0.4
CAPN8A6NHC0 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN8A6NHC0 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.54■□□□□ 0.4
CAPN8A6NHC0 AL671883.3-201ENST00000603274 991 ntBASIC17.54■□□□□ 0.4
CAPN8A6NHC0 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.54■□□□□ 0.4
CAPN8A6NHC0 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CAPN8A6NHC0 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN8A6NHC0 AC046158.3-201ENST00000624947 2558 ntBASIC17.54■□□□□ 0.4
CAPN8A6NHC0 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN8A6NHC0 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN8A6NHC0 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN8A6NHC0 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN8A6NHC0 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN8A6NHC0 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CAPN8A6NHC0 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN8A6NHC0 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CAPN8A6NHC0 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN8A6NHC0 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN8A6NHC0 AL356309.3-201ENST00000624132 1934 ntBASIC17.53■□□□□ 0.4
CAPN8A6NHC0 LYSMD4-203ENST00000378904 2122 ntBASIC17.53■□□□□ 0.4
CAPN8A6NHC0 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
CAPN8A6NHC0 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.53■□□□□ 0.4
CAPN8A6NHC0 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN8A6NHC0 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.53■□□□□ 0.4
CAPN8A6NHC0 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN8A6NHC0 AL020989.1-201ENST00000422979 469 ntBASIC17.53■□□□□ 0.4
CAPN8A6NHC0 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.53■□□□□ 0.4
CAPN8A6NHC0 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.53■□□□□ 0.4
CAPN8A6NHC0 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.53■□□□□ 0.4
CAPN8A6NHC0 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.53■□□□□ 0.4
CAPN8A6NHC0 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN8A6NHC0 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CAPN8A6NHC0 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN8A6NHC0 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.53■□□□□ 0.4
CAPN8A6NHC0 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN8A6NHC0 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN8A6NHC0 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN8A6NHC0 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN8A6NHC0 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CAPN8A6NHC0 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CAPN8A6NHC0 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CAPN8A6NHC0 HLA-A-201ENST00000376802 1334 ntBASIC17.52■□□□□ 0.4
CAPN8A6NHC0 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CAPN8A6NHC0 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CAPN8A6NHC0 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CAPN8A6NHC0 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CAPN8A6NHC0 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CAPN8A6NHC0 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.52■□□□□ 0.4
CAPN8A6NHC0 AC148477.5-201ENST00000625164 1645 ntBASIC17.52■□□□□ 0.4
CAPN8A6NHC0 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CAPN8A6NHC0 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.52■□□□□ 0.4
CAPN8A6NHC0 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CAPN8A6NHC0 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.52■□□□□ 0.4
CAPN8A6NHC0 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
CAPN8A6NHC0 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.52■□□□□ 0.4
CAPN8A6NHC0 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.52■□□□□ 0.4
CAPN8A6NHC0 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.52■□□□□ 0.4
CAPN8A6NHC0 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CAPN8A6NHC0 SCARNA2-201ENST00000458748 420 ntBASIC17.52■□□□□ 0.4
CAPN8A6NHC0 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.52■□□□□ 0.4
CAPN8A6NHC0 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.52■□□□□ 0.4
CAPN8A6NHC0 LINC02084-201ENST00000606069 1096 ntBASIC17.52■□□□□ 0.4
CAPN8A6NHC0 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.52■□□□□ 0.4
CAPN8A6NHC0 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CAPN8A6NHC0 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CAPN8A6NHC0 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CAPN8A6NHC0 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CAPN8A6NHC0 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.52■□□□□ 0.4
CAPN8A6NHC0 AL138688.1-201ENST00000624851 1594 ntBASIC17.52■□□□□ 0.39
CAPN8A6NHC0 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CAPN8A6NHC0 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CAPN8A6NHC0 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.39
CAPN8A6NHC0 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CAPN8A6NHC0 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CAPN8A6NHC0 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
CAPN8A6NHC0 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.52■□□□□ 0.39
CAPN8A6NHC0 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.52■□□□□ 0.39
CAPN8A6NHC0 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
CAPN8A6NHC0 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms