Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SYNPO2Q9UMS6 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.72■□□□□ 0.75
SYNPO2Q9UMS6 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC19.72■□□□□ 0.75
SYNPO2Q9UMS6 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.72■□□□□ 0.75
SYNPO2Q9UMS6 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SYNPO2Q9UMS6 MTRF1LP2-201ENST00000506027 1122 ntBASIC19.72■□□□□ 0.75
SYNPO2Q9UMS6 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.72■□□□□ 0.75
SYNPO2Q9UMS6 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SYNPO2Q9UMS6 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC19.72■□□□□ 0.75
SYNPO2Q9UMS6 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
SYNPO2Q9UMS6 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SYNPO2Q9UMS6 AC004835.2-201ENST00000603762 682 ntBASIC19.72■□□□□ 0.75
SYNPO2Q9UMS6 AL161645.1-201ENST00000622716 1255 ntBASIC19.72■□□□□ 0.75
SYNPO2Q9UMS6 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC19.72■□□□□ 0.75
SYNPO2Q9UMS6 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC19.72■□□□□ 0.75
SYNPO2Q9UMS6 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.72■□□□□ 0.75
SYNPO2Q9UMS6 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SYNPO2Q9UMS6 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
SYNPO2Q9UMS6 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SYNPO2Q9UMS6 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
SYNPO2Q9UMS6 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SYNPO2Q9UMS6 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SYNPO2Q9UMS6 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SYNPO2Q9UMS6 AKAP8P1-201ENST00000434743 1349 ntBASIC19.72■□□□□ 0.75
SYNPO2Q9UMS6 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.72■□□□□ 0.75
SYNPO2Q9UMS6 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SYNPO2Q9UMS6 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.71■□□□□ 0.75
SYNPO2Q9UMS6 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
SYNPO2Q9UMS6 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.71■□□□□ 0.75
SYNPO2Q9UMS6 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
SYNPO2Q9UMS6 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SYNPO2Q9UMS6 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.71■□□□□ 0.75
SYNPO2Q9UMS6 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
SYNPO2Q9UMS6 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SYNPO2Q9UMS6 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SYNPO2Q9UMS6 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SYNPO2Q9UMS6 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SYNPO2Q9UMS6 RN7SL589P-201ENST00000481268 310 ntBASIC19.71■□□□□ 0.75
SYNPO2Q9UMS6 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.71■□□□□ 0.75
SYNPO2Q9UMS6 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC19.71■□□□□ 0.75
SYNPO2Q9UMS6 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.71■□□□□ 0.75
SYNPO2Q9UMS6 AC087641.1-201ENST00000557561 1021 ntBASIC19.71■□□□□ 0.75
SYNPO2Q9UMS6 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC19.71■□□□□ 0.75
SYNPO2Q9UMS6 MPDU1-223ENST00000582151 728 ntBASIC19.71■□□□□ 0.75
SYNPO2Q9UMS6 AC022145.2-201ENST00000598203 171 ntBASIC19.71■□□□□ 0.75
SYNPO2Q9UMS6 AL009183.1-201ENST00000603760 355 ntBASIC19.71■□□□□ 0.75
SYNPO2Q9UMS6 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC19.71■□□□□ 0.75
SYNPO2Q9UMS6 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC19.71■□□□□ 0.75
SYNPO2Q9UMS6 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SYNPO2Q9UMS6 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SYNPO2Q9UMS6 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SYNPO2Q9UMS6 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SYNPO2Q9UMS6 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC19.71■□□□□ 0.75
SYNPO2Q9UMS6 KRT18P28-201ENST00000453838 1332 ntBASIC19.71■□□□□ 0.75
SYNPO2Q9UMS6 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SYNPO2Q9UMS6 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SYNPO2Q9UMS6 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SYNPO2Q9UMS6 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SYNPO2Q9UMS6 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SYNPO2Q9UMS6 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SYNPO2Q9UMS6 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.7■□□□□ 0.74
SYNPO2Q9UMS6 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SYNPO2Q9UMS6 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SYNPO2Q9UMS6 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SYNPO2Q9UMS6 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SYNPO2Q9UMS6 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
SYNPO2Q9UMS6 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SYNPO2Q9UMS6 LBH-203ENST00000404397 543 ntTSL 4 BASIC19.7■□□□□ 0.74
SYNPO2Q9UMS6 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC19.7■□□□□ 0.74
SYNPO2Q9UMS6 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.7■□□□□ 0.74
SYNPO2Q9UMS6 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
SYNPO2Q9UMS6 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC19.7■□□□□ 0.74
SYNPO2Q9UMS6 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.7■□□□□ 0.74
SYNPO2Q9UMS6 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC19.7■□□□□ 0.74
SYNPO2Q9UMS6 AP001350.2-201ENST00000625104 1094 ntBASIC19.7■□□□□ 0.74
SYNPO2Q9UMS6 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.7■□□□□ 0.74
SYNPO2Q9UMS6 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SYNPO2Q9UMS6 SLC22A20-204ENST00000530038 1673 ntBASIC19.7■□□□□ 0.74
SYNPO2Q9UMS6 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SYNPO2Q9UMS6 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SYNPO2Q9UMS6 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.7■□□□□ 0.74
SYNPO2Q9UMS6 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.7■□□□□ 0.74
SYNPO2Q9UMS6 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SYNPO2Q9UMS6 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SYNPO2Q9UMS6 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SYNPO2Q9UMS6 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC19.69■□□□□ 0.74
SYNPO2Q9UMS6 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SYNPO2Q9UMS6 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SYNPO2Q9UMS6 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SYNPO2Q9UMS6 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
SYNPO2Q9UMS6 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SYNPO2Q9UMS6 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SYNPO2Q9UMS6 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
SYNPO2Q9UMS6 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SYNPO2Q9UMS6 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SYNPO2Q9UMS6 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SYNPO2Q9UMS6 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SYNPO2Q9UMS6 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC19.69■□□□□ 0.74
SYNPO2Q9UMS6 AC004461.1-201ENST00000412461 403 ntBASIC19.69■□□□□ 0.74
SYNPO2Q9UMS6 AC092474.2-201ENST00000424288 719 ntBASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms