Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HPS4Q9NQG7 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HPS4Q9NQG7 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HPS4Q9NQG7 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.87■□□□□ 0.45
HPS4Q9NQG7 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
HPS4Q9NQG7 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.87■□□□□ 0.45
HPS4Q9NQG7 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HPS4Q9NQG7 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
HPS4Q9NQG7 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
HPS4Q9NQG7 AC096734.2-201ENST00000562054 433 ntBASIC17.87■□□□□ 0.45
HPS4Q9NQG7 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.87■□□□□ 0.45
HPS4Q9NQG7 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.87■□□□□ 0.45
HPS4Q9NQG7 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.87■□□□□ 0.45
HPS4Q9NQG7 AC004877.2-201ENST00000623941 599 ntBASIC17.87■□□□□ 0.45
HPS4Q9NQG7 KRT18P28-201ENST00000453838 1332 ntBASIC17.87■□□□□ 0.45
HPS4Q9NQG7 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HPS4Q9NQG7 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HPS4Q9NQG7 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
HPS4Q9NQG7 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
HPS4Q9NQG7 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HPS4Q9NQG7 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
HPS4Q9NQG7 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
HPS4Q9NQG7 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.87■□□□□ 0.45
HPS4Q9NQG7 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.87■□□□□ 0.45
HPS4Q9NQG7 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
HPS4Q9NQG7 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HPS4Q9NQG7 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.87■□□□□ 0.45
HPS4Q9NQG7 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HPS4Q9NQG7 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.87■□□□□ 0.45
HPS4Q9NQG7 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.87■□□□□ 0.45
HPS4Q9NQG7 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.87■□□□□ 0.45
HPS4Q9NQG7 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
HPS4Q9NQG7 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.86■□□□□ 0.45
HPS4Q9NQG7 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.86■□□□□ 0.45
HPS4Q9NQG7 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
HPS4Q9NQG7 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HPS4Q9NQG7 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.86■□□□□ 0.45
HPS4Q9NQG7 MYCLP1-201ENST00000372451 1075 ntBASIC17.86■□□□□ 0.45
HPS4Q9NQG7 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.86■□□□□ 0.45
HPS4Q9NQG7 AC254562.1-201ENST00000417586 456 ntBASIC17.86■□□□□ 0.45
HPS4Q9NQG7 MKNK2P1-201ENST00000437526 628 ntBASIC17.86■□□□□ 0.45
HPS4Q9NQG7 METTL21AP1-201ENST00000438852 635 ntBASIC17.86■□□□□ 0.45
HPS4Q9NQG7 PDPK2P-202ENST00000562415 1191 ntBASIC17.86■□□□□ 0.45
HPS4Q9NQG7 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
HPS4Q9NQG7 SNHG9-202ENST00000564014 471 ntBASIC17.86■□□□□ 0.45
HPS4Q9NQG7 GGTLC5P-201ENST00000617623 998 ntBASIC17.86■□□□□ 0.45
HPS4Q9NQG7 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HPS4Q9NQG7 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.86■□□□□ 0.45
HPS4Q9NQG7 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.86■□□□□ 0.45
HPS4Q9NQG7 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.86■□□□□ 0.45
HPS4Q9NQG7 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
HPS4Q9NQG7 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
HPS4Q9NQG7 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
HPS4Q9NQG7 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HPS4Q9NQG7 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HPS4Q9NQG7 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.86■□□□□ 0.45
HPS4Q9NQG7 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HPS4Q9NQG7 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
HPS4Q9NQG7 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HPS4Q9NQG7 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HPS4Q9NQG7 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HPS4Q9NQG7 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.85■□□□□ 0.45
HPS4Q9NQG7 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
HPS4Q9NQG7 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HPS4Q9NQG7 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
HPS4Q9NQG7 ELL2P1-201ENST00000413990 1906 ntBASIC17.85■□□□□ 0.45
HPS4Q9NQG7 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
HPS4Q9NQG7 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.85■□□□□ 0.45
HPS4Q9NQG7 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.85■□□□□ 0.45
HPS4Q9NQG7 RHOQP3-201ENST00000437982 621 ntBASIC17.85■□□□□ 0.45
HPS4Q9NQG7 BCAR1-209ENST00000546196 1340 ntBASIC17.85■□□□□ 0.45
HPS4Q9NQG7 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.85■□□□□ 0.45
HPS4Q9NQG7 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.85■□□□□ 0.45
HPS4Q9NQG7 KRT19P2-202ENST00000557173 1012 ntBASIC17.85■□□□□ 0.45
HPS4Q9NQG7 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
HPS4Q9NQG7 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.85■□□□□ 0.45
HPS4Q9NQG7 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HPS4Q9NQG7 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.85■□□□□ 0.45
HPS4Q9NQG7 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.85■□□□□ 0.45
HPS4Q9NQG7 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.85■□□□□ 0.45
HPS4Q9NQG7 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
HPS4Q9NQG7 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
HPS4Q9NQG7 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HPS4Q9NQG7 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
HPS4Q9NQG7 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HPS4Q9NQG7 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
HPS4Q9NQG7 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HPS4Q9NQG7 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HPS4Q9NQG7 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
HPS4Q9NQG7 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.84■□□□□ 0.45
HPS4Q9NQG7 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HPS4Q9NQG7 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HPS4Q9NQG7 KRT18P55-202ENST00000578578 1546 ntBASIC17.84■□□□□ 0.45
HPS4Q9NQG7 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HPS4Q9NQG7 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
HPS4Q9NQG7 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.84■□□□□ 0.45
HPS4Q9NQG7 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.84■□□□□ 0.45
HPS4Q9NQG7 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.84■□□□□ 0.45
HPS4Q9NQG7 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.84■□□□□ 0.45
HPS4Q9NQG7 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms