Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SLC52A3Q9NQ40 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.33■□□□□ 0.2
SLC52A3Q9NQ40 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.33■□□□□ 0.2
SLC52A3Q9NQ40 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.33■□□□□ 0.2
SLC52A3Q9NQ40 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.33■□□□□ 0.2
SLC52A3Q9NQ40 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.33■□□□□ 0.2
SLC52A3Q9NQ40 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.33■□□□□ 0.2
SLC52A3Q9NQ40 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC52A3Q9NQ40 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC52A3Q9NQ40 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC52A3Q9NQ40 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC52A3Q9NQ40 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC52A3Q9NQ40 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SLC52A3Q9NQ40 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.33■□□□□ 0.2
SLC52A3Q9NQ40 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.33■□□□□ 0.2
SLC52A3Q9NQ40 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
SLC52A3Q9NQ40 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC52A3Q9NQ40 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SLC52A3Q9NQ40 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
SLC52A3Q9NQ40 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC52A3Q9NQ40 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.33■□□□□ 0.2
SLC52A3Q9NQ40 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.33■□□□□ 0.2
SLC52A3Q9NQ40 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC52A3Q9NQ40 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
SLC52A3Q9NQ40 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC52A3Q9NQ40 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC52A3Q9NQ40 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC52A3Q9NQ40 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC52A3Q9NQ40 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC52A3Q9NQ40 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.32■□□□□ 0.2
SLC52A3Q9NQ40 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC52A3Q9NQ40 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC52A3Q9NQ40 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC52A3Q9NQ40 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
SLC52A3Q9NQ40 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC52A3Q9NQ40 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC52A3Q9NQ40 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC52A3Q9NQ40 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.32■□□□□ 0.2
SLC52A3Q9NQ40 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SLC52A3Q9NQ40 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.32■□□□□ 0.2
SLC52A3Q9NQ40 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC52A3Q9NQ40 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC52A3Q9NQ40 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC52A3Q9NQ40 TSPY22P-201ENST00000427496 604 ntBASIC16.32■□□□□ 0.2
SLC52A3Q9NQ40 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC52A3Q9NQ40 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC52A3Q9NQ40 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC52A3Q9NQ40 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.32■□□□□ 0.2
SLC52A3Q9NQ40 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
SLC52A3Q9NQ40 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.32■□□□□ 0.2
SLC52A3Q9NQ40 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
SLC52A3Q9NQ40 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC52A3Q9NQ40 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.32■□□□□ 0.2
SLC52A3Q9NQ40 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.32■□□□□ 0.2
SLC52A3Q9NQ40 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
SLC52A3Q9NQ40 AC008741.2-201ENST00000612792 3115 ntBASIC16.32■□□□□ 0.2
SLC52A3Q9NQ40 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC52A3Q9NQ40 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC52A3Q9NQ40 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC52A3Q9NQ40 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC52A3Q9NQ40 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.31■□□□□ 0.2
SLC52A3Q9NQ40 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.31■□□□□ 0.2
SLC52A3Q9NQ40 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC52A3Q9NQ40 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC52A3Q9NQ40 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC52A3Q9NQ40 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC52A3Q9NQ40 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
SLC52A3Q9NQ40 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
SLC52A3Q9NQ40 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC52A3Q9NQ40 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC52A3Q9NQ40 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SLC52A3Q9NQ40 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.31■□□□□ 0.2
SLC52A3Q9NQ40 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SLC52A3Q9NQ40 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC52A3Q9NQ40 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
SLC52A3Q9NQ40 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC52A3Q9NQ40 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC52A3Q9NQ40 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC52A3Q9NQ40 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC52A3Q9NQ40 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC52A3Q9NQ40 AC091607.1-201ENST00000490318 1060 ntBASIC16.31■□□□□ 0.2
SLC52A3Q9NQ40 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.31■□□□□ 0.2
SLC52A3Q9NQ40 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC52A3Q9NQ40 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.31■□□□□ 0.2
SLC52A3Q9NQ40 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC52A3Q9NQ40 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC52A3Q9NQ40 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC52A3Q9NQ40 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC52A3Q9NQ40 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC52A3Q9NQ40 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC52A3Q9NQ40 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC52A3Q9NQ40 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SLC52A3Q9NQ40 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC52A3Q9NQ40 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.31■□□□□ 0.2
SLC52A3Q9NQ40 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC52A3Q9NQ40 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC52A3Q9NQ40 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC52A3Q9NQ40 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.3■□□□□ 0.2
SLC52A3Q9NQ40 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC52A3Q9NQ40 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms