Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RAB3IL1Q8TBN0 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.27■□□□□ 0.35
RAB3IL1Q8TBN0 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.27■□□□□ 0.35
RAB3IL1Q8TBN0 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RAB3IL1Q8TBN0 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
RAB3IL1Q8TBN0 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RAB3IL1Q8TBN0 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
RAB3IL1Q8TBN0 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RAB3IL1Q8TBN0 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RAB3IL1Q8TBN0 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RAB3IL1Q8TBN0 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.35
RAB3IL1Q8TBN0 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RAB3IL1Q8TBN0 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
RAB3IL1Q8TBN0 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.27■□□□□ 0.35
RAB3IL1Q8TBN0 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.27■□□□□ 0.35
RAB3IL1Q8TBN0 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.26■□□□□ 0.35
RAB3IL1Q8TBN0 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.26■□□□□ 0.35
RAB3IL1Q8TBN0 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAB3IL1Q8TBN0 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAB3IL1Q8TBN0 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB3IL1Q8TBN0 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB3IL1Q8TBN0 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB3IL1Q8TBN0 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB3IL1Q8TBN0 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB3IL1Q8TBN0 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAB3IL1Q8TBN0 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAB3IL1Q8TBN0 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAB3IL1Q8TBN0 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.26■□□□□ 0.35
RAB3IL1Q8TBN0 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.26■□□□□ 0.35
RAB3IL1Q8TBN0 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.26■□□□□ 0.35
RAB3IL1Q8TBN0 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
RAB3IL1Q8TBN0 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.26■□□□□ 0.35
RAB3IL1Q8TBN0 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB3IL1Q8TBN0 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAB3IL1Q8TBN0 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAB3IL1Q8TBN0 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
RAB3IL1Q8TBN0 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAB3IL1Q8TBN0 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB3IL1Q8TBN0 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB3IL1Q8TBN0 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAB3IL1Q8TBN0 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RAB3IL1Q8TBN0 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAB3IL1Q8TBN0 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB3IL1Q8TBN0 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RAB3IL1Q8TBN0 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB3IL1Q8TBN0 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
RAB3IL1Q8TBN0 CICP6-201ENST00000457191 2729 ntBASIC17.26■□□□□ 0.35
RAB3IL1Q8TBN0 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB3IL1Q8TBN0 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
RAB3IL1Q8TBN0 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB3IL1Q8TBN0 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RAB3IL1Q8TBN0 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RAB3IL1Q8TBN0 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
RAB3IL1Q8TBN0 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
RAB3IL1Q8TBN0 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RAB3IL1Q8TBN0 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB3IL1Q8TBN0 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
RAB3IL1Q8TBN0 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB3IL1Q8TBN0 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB3IL1Q8TBN0 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.25■□□□□ 0.35
RAB3IL1Q8TBN0 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB3IL1Q8TBN0 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RAB3IL1Q8TBN0 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB3IL1Q8TBN0 AP000523.1-201ENST00000398242 1049 ntBASIC17.25■□□□□ 0.35
RAB3IL1Q8TBN0 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RAB3IL1Q8TBN0 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.25■□□□□ 0.35
RAB3IL1Q8TBN0 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB3IL1Q8TBN0 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.25■□□□□ 0.35
RAB3IL1Q8TBN0 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.25■□□□□ 0.35
RAB3IL1Q8TBN0 EGLN1P1-201ENST00000531623 762 ntBASIC17.25■□□□□ 0.35
RAB3IL1Q8TBN0 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.25■□□□□ 0.35
RAB3IL1Q8TBN0 AC073912.3-201ENST00000624414 853 ntBASIC17.25■□□□□ 0.35
RAB3IL1Q8TBN0 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.25■□□□□ 0.35
RAB3IL1Q8TBN0 AC078925.2-201ENST00000624013 1973 ntBASIC17.25■□□□□ 0.35
RAB3IL1Q8TBN0 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.25■□□□□ 0.35
RAB3IL1Q8TBN0 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB3IL1Q8TBN0 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.25■□□□□ 0.35
RAB3IL1Q8TBN0 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
RAB3IL1Q8TBN0 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB3IL1Q8TBN0 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB3IL1Q8TBN0 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
RAB3IL1Q8TBN0 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RAB3IL1Q8TBN0 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RAB3IL1Q8TBN0 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RAB3IL1Q8TBN0 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
RAB3IL1Q8TBN0 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.25■□□□□ 0.35
RAB3IL1Q8TBN0 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAB3IL1Q8TBN0 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.24■□□□□ 0.35
RAB3IL1Q8TBN0 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.24■□□□□ 0.35
RAB3IL1Q8TBN0 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB3IL1Q8TBN0 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB3IL1Q8TBN0 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAB3IL1Q8TBN0 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB3IL1Q8TBN0 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.24■□□□□ 0.35
RAB3IL1Q8TBN0 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.24■□□□□ 0.35
RAB3IL1Q8TBN0 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
RAB3IL1Q8TBN0 KRT8P9-201ENST00000558927 1449 ntBASIC17.24■□□□□ 0.35
RAB3IL1Q8TBN0 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB3IL1Q8TBN0 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
RAB3IL1Q8TBN0 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms