Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIX5Q8N196 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIX5Q8N196 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIX5Q8N196 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIX5Q8N196 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIX5Q8N196 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SIX5Q8N196 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
SIX5Q8N196 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
SIX5Q8N196 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SIX5Q8N196 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SIX5Q8N196 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.64■□□□□ 0.41
SIX5Q8N196 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
SIX5Q8N196 BX276092.7-203ENST00000637198 1536 ntBASIC17.64■□□□□ 0.41
SIX5Q8N196 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.64■□□□□ 0.41
SIX5Q8N196 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.64■□□□□ 0.41
SIX5Q8N196 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SIX5Q8N196 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.64■□□□□ 0.41
SIX5Q8N196 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.64■□□□□ 0.41
SIX5Q8N196 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.64■□□□□ 0.41
SIX5Q8N196 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SIX5Q8N196 AC079140.1-201ENST00000508039 487 ntBASIC17.64■□□□□ 0.41
SIX5Q8N196 AL512356.2-201ENST00000546955 174 ntBASIC17.64■□□□□ 0.41
SIX5Q8N196 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.64■□□□□ 0.41
SIX5Q8N196 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SIX5Q8N196 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SIX5Q8N196 LINC02560-201ENST00000596379 459 ntBASIC17.64■□□□□ 0.41
SIX5Q8N196 AC116407.2-201ENST00000613639 860 ntBASIC17.64■□□□□ 0.41
SIX5Q8N196 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SIX5Q8N196 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.64■□□□□ 0.41
SIX5Q8N196 AL590787.1-201ENST00000568856 1315 ntBASIC17.64■□□□□ 0.41
SIX5Q8N196 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SIX5Q8N196 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.64■□□□□ 0.41
SIX5Q8N196 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SIX5Q8N196 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SIX5Q8N196 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SIX5Q8N196 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SIX5Q8N196 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SIX5Q8N196 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SIX5Q8N196 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SIX5Q8N196 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.64■□□□□ 0.41
SIX5Q8N196 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SIX5Q8N196 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
SIX5Q8N196 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
SIX5Q8N196 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SIX5Q8N196 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.63■□□□□ 0.41
SIX5Q8N196 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.63■□□□□ 0.41
SIX5Q8N196 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.63■□□□□ 0.41
SIX5Q8N196 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
SIX5Q8N196 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SIX5Q8N196 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SIX5Q8N196 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.63■□□□□ 0.41
SIX5Q8N196 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SIX5Q8N196 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.63■□□□□ 0.41
SIX5Q8N196 FAM58DP-201ENST00000428076 619 ntBASIC17.63■□□□□ 0.41
SIX5Q8N196 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.63■□□□□ 0.41
SIX5Q8N196 FAM207CP-201ENST00000443486 507 ntBASIC17.63■□□□□ 0.41
SIX5Q8N196 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.63■□□□□ 0.41
SIX5Q8N196 RN7SL589P-201ENST00000481268 310 ntBASIC17.63■□□□□ 0.41
SIX5Q8N196 IGHV3-42-201ENST00000520410 361 ntBASIC17.63■□□□□ 0.41
SIX5Q8N196 DUX4L17-201ENST00000557360 1267 ntBASIC17.63■□□□□ 0.41
SIX5Q8N196 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.63■□□□□ 0.41
SIX5Q8N196 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.63■□□□□ 0.41
SIX5Q8N196 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.63■□□□□ 0.41
SIX5Q8N196 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.63■□□□□ 0.41
SIX5Q8N196 AL008721.1-201ENST00000609964 604 ntBASIC17.63■□□□□ 0.41
SIX5Q8N196 AP001059.3-201ENST00000619053 235 ntBASIC17.63■□□□□ 0.41
SIX5Q8N196 AC008761.3-201ENST00000624803 892 ntBASIC17.63■□□□□ 0.41
SIX5Q8N196 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SIX5Q8N196 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.63■□□□□ 0.41
SIX5Q8N196 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SIX5Q8N196 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SIX5Q8N196 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SIX5Q8N196 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SIX5Q8N196 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SIX5Q8N196 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SIX5Q8N196 AC004408.2-201ENST00000623613 2777 ntBASIC17.62■□□□□ 0.41
SIX5Q8N196 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SIX5Q8N196 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SIX5Q8N196 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.62■□□□□ 0.41
SIX5Q8N196 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SIX5Q8N196 PKD1P1-201ENST00000458669 6805 ntBASIC17.62■□□□□ 0.41
SIX5Q8N196 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.62■□□□□ 0.41
SIX5Q8N196 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.62■□□□□ 0.41
SIX5Q8N196 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SIX5Q8N196 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SIX5Q8N196 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SIX5Q8N196 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SIX5Q8N196 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.62■□□□□ 0.41
SIX5Q8N196 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.62■□□□□ 0.41
SIX5Q8N196 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SIX5Q8N196 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.62■□□□□ 0.41
SIX5Q8N196 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SIX5Q8N196 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.62■□□□□ 0.41
SIX5Q8N196 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.62■□□□□ 0.41
SIX5Q8N196 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SIX5Q8N196 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SIX5Q8N196 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.62■□□□□ 0.41
SIX5Q8N196 AL390754.1-201ENST00000619088 582 ntBASIC17.62■□□□□ 0.41
SIX5Q8N196 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SIX5Q8N196 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms