Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 BNIP3P18-201ENST00000593976 575 ntBASIC20.31■□□□□ 0.84
CCDC83Q8IWF9 AC073592.5-201ENST00000624854 528 ntBASIC20.31■□□□□ 0.84
CCDC83Q8IWF9 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.31■□□□□ 0.84
CCDC83Q8IWF9 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC83Q8IWF9 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC83Q8IWF9 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC83Q8IWF9 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC83Q8IWF9 IER3-202ENST00000376377 1350 ntBASIC20.31■□□□□ 0.84
CCDC83Q8IWF9 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC83Q8IWF9 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC83Q8IWF9 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC83Q8IWF9 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC83Q8IWF9 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC83Q8IWF9 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC83Q8IWF9 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CCDC83Q8IWF9 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC83Q8IWF9 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC83Q8IWF9 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC83Q8IWF9 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC83Q8IWF9 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.3■□□□□ 0.84
CCDC83Q8IWF9 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CCDC83Q8IWF9 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC83Q8IWF9 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC83Q8IWF9 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.3■□□□□ 0.84
CCDC83Q8IWF9 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.3■□□□□ 0.84
CCDC83Q8IWF9 KLF4P1-201ENST00000412782 1185 ntBASIC20.3■□□□□ 0.84
CCDC83Q8IWF9 LINC00265-3P-201ENST00000447588 903 ntBASIC20.3■□□□□ 0.84
CCDC83Q8IWF9 AC096582.2-201ENST00000510860 516 ntBASIC20.3■□□□□ 0.84
CCDC83Q8IWF9 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC83Q8IWF9 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC83Q8IWF9 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CCDC83Q8IWF9 NSUN5P1-202ENST00000421140 1535 ntBASIC20.3■□□□□ 0.84
CCDC83Q8IWF9 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC83Q8IWF9 NSUN5P2-203ENST00000457352 1529 ntBASIC20.3■□□□□ 0.84
CCDC83Q8IWF9 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC83Q8IWF9 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC83Q8IWF9 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CCDC83Q8IWF9 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC83Q8IWF9 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CCDC83Q8IWF9 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC83Q8IWF9 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC83Q8IWF9 CES3-203ENST00000543856 3178 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC83Q8IWF9 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC83Q8IWF9 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC83Q8IWF9 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC83Q8IWF9 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC83Q8IWF9 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC83Q8IWF9 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CCDC83Q8IWF9 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CCDC83Q8IWF9 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC83Q8IWF9 RCN1P2-201ENST00000398357 915 ntBASIC20.29■□□□□ 0.84
CCDC83Q8IWF9 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC83Q8IWF9 KRT17P6-201ENST00000453795 1220 ntBASIC20.29■□□□□ 0.84
CCDC83Q8IWF9 MINOS1P3-201ENST00000457048 203 ntBASIC20.29■□□□□ 0.84
CCDC83Q8IWF9 CDV3-207ENST00000508481 661 ntTSL 3 BASIC20.29■□□□□ 0.84
CCDC83Q8IWF9 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20.29■□□□□ 0.84
CCDC83Q8IWF9 MPI-205ENST00000562606 1052 ntTSL 3 BASIC20.29■□□□□ 0.84
CCDC83Q8IWF9 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC83Q8IWF9 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC83Q8IWF9 Z69720.1-201ENST00000601483 472 ntBASIC20.29■□□□□ 0.84
CCDC83Q8IWF9 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC83Q8IWF9 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC83Q8IWF9 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC83Q8IWF9 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC83Q8IWF9 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC83Q8IWF9 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC83Q8IWF9 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC83Q8IWF9 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC83Q8IWF9 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC83Q8IWF9 INTS4P1-201ENST00000438455 1935 ntBASIC20.29■□□□□ 0.84
CCDC83Q8IWF9 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC83Q8IWF9 STX3-203ENST00000529177 1571 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC83Q8IWF9 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC83Q8IWF9 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC83Q8IWF9 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.28■□□□□ 0.84
CCDC83Q8IWF9 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC83Q8IWF9 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC83Q8IWF9 AC078925.2-201ENST00000624013 1973 ntBASIC20.28■□□□□ 0.84
CCDC83Q8IWF9 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
CCDC83Q8IWF9 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC83Q8IWF9 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC83Q8IWF9 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC83Q8IWF9 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC83Q8IWF9 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
CCDC83Q8IWF9 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC83Q8IWF9 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC83Q8IWF9 AC003669.1-201ENST00000334569 611 ntBASIC20.28■□□□□ 0.84
CCDC83Q8IWF9 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC83Q8IWF9 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC83Q8IWF9 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.28■□□□□ 0.84
CCDC83Q8IWF9 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC83Q8IWF9 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC83Q8IWF9 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.28■□□□□ 0.84
CCDC83Q8IWF9 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
CCDC83Q8IWF9 AC079328.2-201ENST00000561241 3354 ntBASIC20.28■□□□□ 0.84
CCDC83Q8IWF9 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC83Q8IWF9 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC83Q8IWF9 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
CCDC83Q8IWF9 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC83Q8IWF9 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms