Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.28■□□□□ 0.04
RTTNQ86VV8 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.28■□□□□ 0.04
RTTNQ86VV8 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RTTNQ86VV8 AC116407.2-201ENST00000613639 860 ntBASIC15.28■□□□□ 0.04
RTTNQ86VV8 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.28■□□□□ 0.04
RTTNQ86VV8 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RTTNQ86VV8 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RTTNQ86VV8 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RTTNQ86VV8 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
RTTNQ86VV8 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RTTNQ86VV8 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
RTTNQ86VV8 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RTTNQ86VV8 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
RTTNQ86VV8 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.27■□□□□ 0.04
RTTNQ86VV8 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
RTTNQ86VV8 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.27■□□□□ 0.04
RTTNQ86VV8 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.27■□□□□ 0.04
RTTNQ86VV8 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.27■□□□□ 0.04
RTTNQ86VV8 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
RTTNQ86VV8 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.27■□□□□ 0.04
RTTNQ86VV8 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.27■□□□□ 0.04
RTTNQ86VV8 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.27■□□□□ 0.04
RTTNQ86VV8 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.27■□□□□ 0.04
RTTNQ86VV8 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
RTTNQ86VV8 AP001160.2-201ENST00000596071 487 ntBASIC15.27■□□□□ 0.04
RTTNQ86VV8 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RTTNQ86VV8 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.27■□□□□ 0.04
RTTNQ86VV8 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RTTNQ86VV8 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RTTNQ86VV8 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RTTNQ86VV8 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.27■□□□□ 0.04
RTTNQ86VV8 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
RTTNQ86VV8 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RTTNQ86VV8 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
RTTNQ86VV8 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.27■□□□□ 0.03
RTTNQ86VV8 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
RTTNQ86VV8 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RTTNQ86VV8 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RTTNQ86VV8 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RTTNQ86VV8 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RTTNQ86VV8 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC15.27■□□□□ 0.03
RTTNQ86VV8 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.27■□□□□ 0.03
RTTNQ86VV8 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.27■□□□□ 0.03
RTTNQ86VV8 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RTTNQ86VV8 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RTTNQ86VV8 ABCD1P5-201ENST00000445663 754 ntBASIC15.27■□□□□ 0.03
RTTNQ86VV8 PGAM5P1-201ENST00000518923 814 ntBASIC15.27■□□□□ 0.03
RTTNQ86VV8 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.27■□□□□ 0.03
RTTNQ86VV8 AC148477.5-201ENST00000625164 1645 ntBASIC15.26■□□□□ 0.03
RTTNQ86VV8 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.26■□□□□ 0.03
RTTNQ86VV8 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RTTNQ86VV8 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RTTNQ86VV8 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RTTNQ86VV8 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
RTTNQ86VV8 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
RTTNQ86VV8 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RTTNQ86VV8 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RTTNQ86VV8 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RTTNQ86VV8 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RTTNQ86VV8 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RTTNQ86VV8 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
RTTNQ86VV8 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RTTNQ86VV8 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RTTNQ86VV8 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RTTNQ86VV8 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.26■□□□□ 0.03
RTTNQ86VV8 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RTTNQ86VV8 POM121L3P-201ENST00000419331 1163 ntBASIC15.26■□□□□ 0.03
RTTNQ86VV8 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.26■□□□□ 0.03
RTTNQ86VV8 HLA-J-202ENST00000469281 1241 ntBASIC15.26■□□□□ 0.03
RTTNQ86VV8 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.26■□□□□ 0.03
RTTNQ86VV8 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RTTNQ86VV8 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RTTNQ86VV8 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RTTNQ86VV8 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.26■□□□□ 0.03
RTTNQ86VV8 IGHV3-41-201ENST00000613121 348 ntBASIC15.26■□□□□ 0.03
RTTNQ86VV8 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
RTTNQ86VV8 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RTTNQ86VV8 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
RTTNQ86VV8 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RTTNQ86VV8 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RTTNQ86VV8 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RTTNQ86VV8 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RTTNQ86VV8 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.26■□□□□ 0.03
RTTNQ86VV8 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RTTNQ86VV8 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RTTNQ86VV8 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RTTNQ86VV8 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RTTNQ86VV8 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.26■□□□□ 0.03
RTTNQ86VV8 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RTTNQ86VV8 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RTTNQ86VV8 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
RTTNQ86VV8 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
RTTNQ86VV8 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
RTTNQ86VV8 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RTTNQ86VV8 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RTTNQ86VV8 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.25■□□□□ 0.03
RTTNQ86VV8 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RTTNQ86VV8 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RTTNQ86VV8 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RTTNQ86VV8 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms